Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0026
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113451-1|AAM29456.1|  174|Drosophila melanogaster RE33542p pro...    27   4.8  
BT003608-1|AAO39611.1|  377|Drosophila melanogaster GH19274p pro...    27   8.4  
BT003318-1|AAO25078.1|  517|Drosophila melanogaster AT26991p pro...    27   8.4  
BT001317-1|AAN71072.1|  517|Drosophila melanogaster AT15066p pro...    27   8.4  
AE014296-204|AAN11465.1|  517|Drosophila melanogaster CG9130-PB,...    27   8.4  
AE014296-203|AAN11464.1|  517|Drosophila melanogaster CG9130-PA,...    27   8.4  

>AY113451-1|AAM29456.1|  174|Drosophila melanogaster RE33542p
           protein.
          Length = 174

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 239 YYPLPVPVSVQLTPLVARALRPSVRSKEASGRPG 138
           Y PL +    Q  PL+   LRP +RS+ +S   G
Sbjct: 91  YQPLGLDYQQQSCPLLPHPLRPCIRSRVSSTSSG 124


>BT003608-1|AAO39611.1|  377|Drosophila melanogaster GH19274p
           protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -3

Query: 143 PGGCCRRCSICHWC*PRPAVRSSCRGLRSCLVPNSCSP 30
           P  CC  C  C  C P P    SC    SC  P SC P
Sbjct: 97  PEPCCGPCGPCGPCGPCPP-PPSC---GSCPPPPSCGP 130


>BT003318-1|AAO25078.1|  517|Drosophila melanogaster AT26991p
           protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -3

Query: 143 PGGCCRRCSICHWC*PRPAVRSSCRGLRSCLVPNSCSP 30
           P  CC  C  C  C P P    SC    SC  P SC P
Sbjct: 237 PEPCCGPCGPCGPCGPCPP-PPSC---GSCPPPPSCGP 270


>BT001317-1|AAN71072.1|  517|Drosophila melanogaster AT15066p
           protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -3

Query: 143 PGGCCRRCSICHWC*PRPAVRSSCRGLRSCLVPNSCSP 30
           P  CC  C  C  C P P    SC    SC  P SC P
Sbjct: 237 PEPCCGPCGPCGPCGPCPP-PPSC---GSCPPPPSCGP 270


>AE014296-204|AAN11465.1|  517|Drosophila melanogaster CG9130-PB,
           isoform B protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -3

Query: 143 PGGCCRRCSICHWC*PRPAVRSSCRGLRSCLVPNSCSP 30
           P  CC  C  C  C P P    SC    SC  P SC P
Sbjct: 237 PEPCCGPCGPCGPCGPCPP-PPSC---GSCPPPPSCGP 270


>AE014296-203|AAN11464.1|  517|Drosophila melanogaster CG9130-PA,
           isoform A protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -3

Query: 143 PGGCCRRCSICHWC*PRPAVRSSCRGLRSCLVPNSCSP 30
           P  CC  C  C  C P P    SC    SC  P SC P
Sbjct: 237 PEPCCGPCGPCGPCGPCPP-PPSC---GSCPPPPSCGP 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,368,204
Number of Sequences: 53049
Number of extensions: 306372
Number of successful extensions: 802
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)