Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0026
         (343 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g30720.1 68414.m03755 FAD-binding domain-containing protein s...    28   1.9  
At3g01780.1 68416.m00118 expressed protein est hit,                    27   2.5  
At2g20940.1 68415.m02469 expressed protein                             27   3.3  
At5g51060.1 68418.m06329 respiratory burst oxidase protein C (Rb...    27   4.3  
At4g07390.1 68417.m01134 PQ-loop repeat family protein / transme...    27   4.3  
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB...    26   5.7  
At3g63090.1 68416.m07086 expressed protein                             26   7.6  
At3g06150.1 68416.m00707 expressed protein                             26   7.6  
At3g47750.1 68416.m05202 ABC transporter family protein probable...    25   10.0 

>At1g30720.1 68414.m03755 FAD-binding domain-containing protein
           similar to SP|P30986 reticuline oxidase precursor
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase) [Eschscholzia
           californica]; contains PF01565 FAD binding domain
          Length = 527

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 245 WVYYPLPVPVSVQLTPLVARAL 180
           W  YP+  P SV L PLVA+ L
Sbjct: 347 WDDYPVGTPTSVLLNPLVAKKL 368


>At3g01780.1 68416.m00118 expressed protein est hit,
          Length = 1176

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 211 FSLHRLWLGHYDPRCARKKPLDGLVVVAV 125
           FS H+L +  Y+P  A+ + L+GL+  A+
Sbjct: 711 FSHHKLTVQFYEPSAAQDRKLEGLIHKAI 739


>At2g20940.1 68415.m02469 expressed protein
          Length = 129

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 236 YPLPVPVSVQLTPLVARALR 177
           +P+ VP+++ LTP +AR LR
Sbjct: 101 FPIRVPITMALTPPIARFLR 120


>At5g51060.1 68418.m06329 respiratory burst oxidase protein C
           (RbohC) / NADPH oxidase nearly identical to respiratory
           burst oxidase protein C from Arabidopsis thaliana
           [gi:3242785]
          Length = 905

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 260 HNHRTWVYYPLPVPVSVQLTPLVARALRPSVRS 162
           HN  TW+Y  L VPV +     + RA R S+++
Sbjct: 562 HNKTTWMY--LVVPVVLYACERLIRAFRSSIKA 592


>At4g07390.1 68417.m01134 PQ-loop repeat family protein /
           transmembrane family protein similar to SP|Q60441
           Mannose-P-dolichol utilization defect 1 protein
           (Suppressor of Lec15 and Lec35 glycosylation mutation)
           {Cricetulus griseus}, Lec35 protein [Cricetulus griseus]
           GI:9858721; contains Pfam profile PF04193: PQ loop
           repeat
          Length = 235

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 239 YYPLPVPVSVQLTPLVARALRPSV 168
           YY  PVPV+  + PL+  A+ P+V
Sbjct: 110 YYSQPVPVTTWIRPLLYCAVAPTV 133


>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
           identical to abscisic acid-insensitive protein 3
           GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
           Cell 4 (10), 1251-1261 (1992))
          Length = 720

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 248 TWVYYPLPVPVSVQLTPLVARALRPSVRSKEASGRP 141
           TW+Y+P    V  QL P++   L    R+  AS  P
Sbjct: 515 TWMYWPNVPAVPPQLPPVMETQLPTMDRAGSASAMP 550


>At3g63090.1 68416.m07086 expressed protein
          Length = 404

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 212 RLPE-LAGDNRPK-CGDYVSEFTLQPGDVGDGQYLKKKSNNSRLRF 343
           RL E +  D R K C   V E   +PG V   +YL+K+    RL F
Sbjct: 43  RLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTF 88


>At3g06150.1 68416.m00707 expressed protein 
          Length = 594

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 44  NSCSPGIHYSRAP 6
           N C+ G+HY RAP
Sbjct: 551 NRCNDGVHYGRAP 563


>At3g47750.1 68416.m05202 ABC transporter family protein probable
           transport protein ABC-C, Homo sapiens, PIR2:S71363
          Length = 944

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 83  RSSCRGLRSCLVPNSCSPGIH 21
           RSSCR   SC  PNS    +H
Sbjct: 121 RSSCRRTGSCPDPNSFDTNLH 141


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,118,864
Number of Sequences: 28952
Number of extensions: 134984
Number of successful extensions: 298
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 409426656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)