Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0022
         (347 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0610 + 18944084-18944244,18944471-18944564,18944809-189449...    62   9e-11
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53...    26   7.1  
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45...    26   7.1  
05_01_0038 + 260080-260380,260852-261022,261764-261810,262266-26...    26   9.3  
04_04_0802 - 28155281-28155725,28155750-28156081,28156164-281562...    26   9.3  

>09_04_0610 +
           18944084-18944244,18944471-18944564,18944809-18944928,
           18945012-18945060,18945985-18946084,18946196-18946257,
           18946365-18946426,18947080-18947187
          Length = 251

 Score = 62.5 bits (145), Expect = 9e-11
 Identities = 29/81 (35%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = +3

Query: 114 ELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLIL---SSQKKIELIQVQDSQVMIRARLL 284
           EL+LD  IR WV +P+ ++  L+G++R++V+ ++   S+    +   V++ QV+IRAR L
Sbjct: 4   ELVLDTAIRDWVLVPLSVVMVLIGVLRYFVAKLMRSPSASPSPDPKLVKEGQVVIRARNL 63

Query: 285 RENGKYLPRQSFAMRRHWFNN 347
           R N +Y+P ++F  R+ ++ N
Sbjct: 64  RINSQYIPAKAFKSRKVYYTN 84


>12_01_0063 -
           535364-536085,536226-536439,536989-537981,538238-538255,
           538601-538860,539950-540073,540978-541310,541447-541531,
           541683-541768,541843-541941,542041-542180,542717-543043,
           543163-543774,543887-543971,543972-544067,544147-544500,
           544536-544559,544597-544707,544811-544894,545468-545546,
           546122-546279,546412-546528,546622-546780,546857-546939,
           547525-547627,549184-549495
          Length = 1925

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 99  LSQMPELLLDPNIRFWVFL 155
           LS++P+L+ DPN  F V L
Sbjct: 322 LSKLPQLIADPNAEFQVLL 340


>11_01_0061 -
           456521-457389,457534-457659,458377-459307,459564-459581,
           459924-460183,461834-461918,462587-462919,463053-463137,
           463289-463374,463455-463556,463656-463795,464332-464658,
           464778-465389,465502-465586,465587-465682,465762-466115,
           466212-466322,466426-466509,467086-467164,467742-467899,
           468034-468150,468240-468398,468475-468557,469098-469200,
           470784-471080
          Length = 1899

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 99  LSQMPELLLDPNIRFWVFL 155
           LS++P+L+ DPN  F V L
Sbjct: 317 LSKLPQLIADPNAEFQVLL 335


>05_01_0038 +
           260080-260380,260852-261022,261764-261810,262266-262412,
           262495-262569,262826-262935,263032-263159,263368-263429,
           263599-263748,263827-263861,264083-264151,264538-264629,
           264718-264794,265434-265532
          Length = 520

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +3

Query: 54  KIKSITYDISEI*NLLSQMPELLLDPNIRFWVFLPIVIITFL 179
           K++ +    ++I  +LS +  L L P++  W+  PI+I TFL
Sbjct: 320 KLRVLLLGSNQIDEVLS-VDSLNLFPSLTLWLSTPILISTFL 360


>04_04_0802 -
           28155281-28155725,28155750-28156081,28156164-28156266,
           28156347-28156528,28156617-28156800,28156872-28156960,
           28157634-28157710,28157837-28157927,28158230-28158430
          Length = 567

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 44  HILKNKINYLRHK*NIESAKPNAR 115
           HILK K+N+ R+  +  + +PNA+
Sbjct: 428 HILKRKLNFRRYFGHKRTIRPNAK 451


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,305,035
Number of Sequences: 37544
Number of extensions: 140990
Number of successful extensions: 320
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)