Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0022
         (347 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK222953-1|BAD96673.1|  219|Homo sapiens 30 kDa protein variant ...   122   3e-28
BC022807-1|AAH22807.1|  261|Homo sapiens transmembrane protein 1...   122   4e-28
AF157321-1|AAF67487.1|  261|Homo sapiens 30 kDa protein protein.      122   4e-28
AK172843-1|BAD18807.1|  221|Homo sapiens protein ( Homo sapiens ...   121   7e-28
AF225987-1|AAK00219.1| 2000|Homo sapiens voltage-gated sodium ch...    29   5.3  
AF225986-1|AAK00218.1| 1951|Homo sapiens voltage-gated sodium ch...    29   5.3  
Y14494-1|CAA74834.1|  678|Homo sapiens aralar1 protein.                28   7.0  
BC016932-1|AAH16932.1|  678|Homo sapiens solute carrier family 2...    28   7.0  
AJ496568-1|CAD43090.1|  678|Homo sapiens mitochondrial aspartate...    28   7.0  
AC068039-2|AAY24134.1|  678|Homo sapiens unknown protein.              28   7.0  

>AK222953-1|BAD96673.1|  219|Homo sapiens 30 kDa protein variant
           protein.
          Length = 219

 Score =  122 bits (294), Expect = 3e-28
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = +3

Query: 111 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 290
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRILRE 63

Query: 291 NGKYLPRQSFAMRRHWFNN 347
           NGKY+P+QSF  R+++FNN
Sbjct: 64  NGKYIPKQSFLTRKYYFNN 82


>BC022807-1|AAH22807.1|  261|Homo sapiens transmembrane protein 111
           protein.
          Length = 261

 Score =  122 bits (293), Expect = 4e-28
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = +3

Query: 111 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 290
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 291 NGKYLPRQSFAMRRHWFNN 347
           NGKY+P+QSF  R+++FNN
Sbjct: 64  NGKYIPKQSFLTRKYYFNN 82


>AF157321-1|AAF67487.1|  261|Homo sapiens 30 kDa protein protein.
          Length = 261

 Score =  122 bits (293), Expect = 4e-28
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = +3

Query: 111 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 290
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 291 NGKYLPRQSFAMRRHWFNN 347
           NGKY+P+QSF  R+++FNN
Sbjct: 64  NGKYIPKQSFLTRKYYFNN 82


>AK172843-1|BAD18807.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ24004 fis, clone KAT01090, highly similar to
           Homo sapiens 30 kDa protein (LOC55831). ).
          Length = 221

 Score =  121 bits (291), Expect = 7e-28
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = +3

Query: 111 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 290
           PELLLD NIR WV LPIVIITF VG +RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGTIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 291 NGKYLPRQSFAMRRHWFNN 347
           NGKY+P+QSF  R+++FNN
Sbjct: 64  NGKYIPKQSFLTRKYYFNN 82


>AF225987-1|AAK00219.1| 2000|Homo sapiens voltage-gated sodium channel
            alpha subunit SCN3A protein.
          Length = 2000

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = +3

Query: 126  DPNIRFWVFLPIVIITFLVGIVRHYVSLILSS 221
            DP++  + F+  +II+FLV +V  Y+++IL +
Sbjct: 1743 DPSVGIFFFVSYIIISFLV-VVNMYIAVILEN 1773


>AF225986-1|AAK00218.1| 1951|Homo sapiens voltage-gated sodium channel
            alpha subunit splice variant SCN3A-s protein.
          Length = 1951

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = +3

Query: 126  DPNIRFWVFLPIVIITFLVGIVRHYVSLILSS 221
            DP++  + F+  +II+FLV +V  Y+++IL +
Sbjct: 1694 DPSVGIFFFVSYIIISFLV-VVNMYIAVILEN 1724


>Y14494-1|CAA74834.1|  678|Homo sapiens aralar1 protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 107 NARVTFRSKYPILGVSTHCHNYIFGWNCETLCITYTVLSKKD*TYS 244
           N  VTF +   I G +   H+  F W+CE + + +    KK   Y+
Sbjct: 103 NGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYT 148


>BC016932-1|AAH16932.1|  678|Homo sapiens solute carrier family 25
           (mitochondrial carrier, Aralar), member 12 protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 107 NARVTFRSKYPILGVSTHCHNYIFGWNCETLCITYTVLSKKD*TYS 244
           N  VTF +   I G +   H+  F W+CE + + +    KK   Y+
Sbjct: 103 NGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYT 148


>AJ496568-1|CAD43090.1|  678|Homo sapiens mitochondrial
           aspartate-glutamate carrier protein protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 107 NARVTFRSKYPILGVSTHCHNYIFGWNCETLCITYTVLSKKD*TYS 244
           N  VTF +   I G +   H+  F W+CE + + +    KK   Y+
Sbjct: 103 NGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYT 148


>AC068039-2|AAY24134.1|  678|Homo sapiens unknown protein.
          Length = 678

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 107 NARVTFRSKYPILGVSTHCHNYIFGWNCETLCITYTVLSKKD*TYS 244
           N  VTF +   I G +   H+  F W+CE + + +    KK   Y+
Sbjct: 103 NGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYT 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,251,598
Number of Sequences: 237096
Number of extensions: 839944
Number of successful extensions: 1072
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)