Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0022
         (347 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-7|CAB60598.1|  234|Caenorhabditis elegans Hypothetical ...   109   5e-25
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ...    28   2.1  
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut...    28   2.1  
Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z72511-6|CAA96659.2|  391|Caenorhabditis elegans Hypothetical pr...    26   8.5  

>AL132865-7|CAB60598.1|  234|Caenorhabditis elegans Hypothetical
           protein Y62E10A.10 protein.
          Length = 234

 Score =  109 bits (262), Expect = 5e-25
 Identities = 48/77 (62%), Positives = 63/77 (81%)
 Frame = +3

Query: 108 MPELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLR 287
           M +LLLDP IR WVFLPIV+ITF +GI+RHYVSL+L ++KK+EL  + D Q ++RARLLR
Sbjct: 1   MTDLLLDPAIRTWVFLPIVVITFFIGILRHYVSLLLMNKKKVELENIADGQYLLRARLLR 60

Query: 288 ENGKYLPRQSFAMRRHW 338
           ENG++LP+ SF  RR +
Sbjct: 61  ENGRFLPKTSFNARRQY 77


>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
            protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +3

Query: 96   LLSQMPELLLDPNIRFWVFLPIV--IITFLVGIVRHYVSL 209
            LL  +P+LL  P   ++V  PIV  +I  ++G++++Y  L
Sbjct: 1177 LLHGLPKLLDSPKFGYYVVGPIVLFVIDRIIGLMQYYKKL 1216


>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
            protein 3 protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +3

Query: 96   LLSQMPELLLDPNIRFWVFLPIV--IITFLVGIVRHYVSL 209
            LL  +P+LL  P   ++V  PIV  +I  ++G++++Y  L
Sbjct: 1177 LLHGLPKLLDSPKFGYYVVGPIVLFVIDRIIGLMQYYKKL 1216


>Z92812-7|CAB07281.2|  341|Caenorhabditis elegans Hypothetical
           protein T03E6.8 protein.
          Length = 341

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 135 IRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQD 254
           +R  V LP+VI+T +V      VSL++    K +L+ + D
Sbjct: 92  LRLNVALPLVIMTHVVLCKSDMVSLVIMQLFKHQLVTLSD 131


>Z72511-6|CAA96659.2|  391|Caenorhabditis elegans Hypothetical
           protein F55A11.5 protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 120 LLDPNIRFWVFLPIVIITFLVGI 188
           L+D  I +W+ +P+ ++ FL+G+
Sbjct: 48  LMDRAISYWMTIPMGLLEFLMGV 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,672,227
Number of Sequences: 27780
Number of extensions: 141176
Number of successful extensions: 301
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)