SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0022
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   3.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   3.2  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   3.2  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   3.2  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   3.2  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   3.2  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    20   9.6  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    20   9.6  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   9.6  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    20   9.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    20   9.6  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    20   9.6  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 191 HNSNQKCNYDN 159
           HN+N K NY+N
Sbjct: 90  HNNNYKYNYNN 100


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 191 HNSNQKCNYDN 159
           HN+N K NY+N
Sbjct: 90  HNNNYKYNYNN 100


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 191 HNSNQKCNYDN 159
           HN+N K NY+N
Sbjct: 91  HNNNYKYNYNN 101


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 191 HNSNQKCNYDN 159
           HN+N K NY+N
Sbjct: 91  HNNNYKYNYNN 101


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 191 HNSNQKCNYDN 159
           HN+N K NY+N
Sbjct: 91  HNNNYKYNYNN 101


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 191 HNSNQKCNYDN 159
           HN+N K NY+N
Sbjct: 91  HNNNYKYNYNN 101


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 16  FNLIFWLINSYI 51
           FNL++W+I  +I
Sbjct: 419 FNLMYWIIYLHI 430


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 16  FNLIFWLINSYI 51
           FNL++W+I  +I
Sbjct: 419 FNLMYWIIYLHI 430


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -3

Query: 162 QWVETPKIGYLDLKVTRAFGLADSIFHLCRK*LILFF 52
           QW ET ++      +   FGL D    L    ++ FF
Sbjct: 62  QWPETRQLKCYMYCLWEQFGLVDDKRELSLNGMLTFF 98


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 233 NLFLRGQYK*YIVSHNSNQKCNYDNG*K 150
           N +    Y  Y  ++N+N   NY+N  K
Sbjct: 87  NNYKYSNYNNYNNNYNNNYNNNYNNNYK 114


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 233 NLFLRGQYK*YIVSHNSNQKCNYDNG*K 150
           N +    Y  Y  ++N+N   NY+N  K
Sbjct: 87  NNYKYSNYNNYNNNYNNNYNNNYNNNYK 114


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 197 VSHNSNQKCNYDNG*K 150
           + +N+N K NY+N  K
Sbjct: 90  IHNNNNYKYNYNNNCK 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,474
Number of Sequences: 438
Number of extensions: 1902
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

- SilkBase 1999-2023 -