Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0018
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1194 + 28305388-28305472,28305603-28305682,28305771-283058... 175 3e-44
02_01_0436 - 3166764-3166949,3167115-3167258,3167343-3167469,316... 175 3e-44
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 126 3e-29
07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756... 35 0.085
04_04_0638 - 26877640-26877825,26877954-26878160,26878866-268789... 34 0.15
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 33 0.34
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 32 0.60
06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402... 31 1.0
02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196... 31 1.4
02_04_0162 - 20441621-20441646,20441919-20442000,20442313-204424... 30 1.8
04_04_0916 + 29390813-29391893,29402054-29402652 29 4.2
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 29 4.2
11_06_0541 + 24771145-24775479 29 5.6
01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,708... 29 5.6
01_06_0910 - 32922459-32922646,32922725-32922823,32923371-329235... 28 9.8
>06_03_1194 +
28305388-28305472,28305603-28305682,28305771-28305839,
28305936-28305993,28306082-28306134,28306229-28306271,
28306360-28306421,28306914-28307027,28307183-28307285,
28307377-28307426,28308138-28308266,28308340-28308591,
28308684-28308763,28309040-28309166,28309247-28309390,
28309849-28310034
Length = 544
Score = 175 bits (427), Expect = 3e-44
Identities = 83/146 (56%), Positives = 99/146 (67%)
Frame = +2
Query: 353 GKTDIYSGICLERDFPGIRIGPEPTTDRFIAVMFDEKEGVIPGNALVVDPKKQFRPLSKF 532
GKT + L +PG IGPEPTTDRF+ VM E IPGN + V F L+ F
Sbjct: 208 GKTTFIKHL-LRTSYPGAHIGPEPTTDRFVVVMSGPDERTIPGNTIAVQADMPFSGLTTF 266
Query: 533 GNAFLNRFQCSTVTSDVLRGISIVDTPGILSGEKQRVDRGYDFTGVLEWFAERVDRIILL 712
G AFL++F+CS + +L I+ VDTPG+LSGEKQR R YDFTGV WFA + D I+LL
Sbjct: 267 GTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRSYDFTGVTSWFAAKCDLILLL 326
Query: 713 FDAHKLDISDEFRRSIEALRGHDDKI 790
FD HKLDISDEF+R I +LRGHDDKI
Sbjct: 327 FDPHKLDISDEFKRVIGSLRGHDDKI 352
>02_01_0436 -
3166764-3166949,3167115-3167258,3167343-3167469,
3167746-3167825,3167933-3168184,3168271-3168399,
3169039-3169088,3169221-3169323,3169429-3169548,
3169725-3169786,3169873-3169915,3169995-3170183,
3170299-3170367,3170460-3170539,3170648-3170723
Length = 569
Score = 175 bits (427), Expect = 3e-44
Identities = 81/146 (55%), Positives = 100/146 (68%)
Frame = +2
Query: 353 GKTDIYSGICLERDFPGIRIGPEPTTDRFIAVMFDEKEGVIPGNALVVDPKKQFRPLSKF 532
GKT + L+ +PG +GPEPTTDRF+ VM E IPGN + V F L+ F
Sbjct: 233 GKTTFIKHL-LQTSYPGAHVGPEPTTDRFVVVMSGSDERTIPGNTIAVQADMPFTGLTTF 291
Query: 533 GNAFLNRFQCSTVTSDVLRGISIVDTPGILSGEKQRVDRGYDFTGVLEWFAERVDRIILL 712
G AFL++F+CS + +L I+ VDTPG+LSGEKQR R YDFTG+ WFA + D I+LL
Sbjct: 292 GGAFLSKFECSQMPHPLLDHITFVDTPGVLSGEKQRTQRSYDFTGITSWFAAKCDLILLL 351
Query: 713 FDAHKLDISDEFRRSIEALRGHDDKI 790
FD HKLDISDEF+R I +LRGHDDKI
Sbjct: 352 FDPHKLDISDEFKRVIASLRGHDDKI 377
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 126 bits (303), Expect = 3e-29
Identities = 69/149 (46%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +2
Query: 353 GKTDIYSGICLERDFPGIRIGPEPTTDRFIAVM-FDEKEGVIPGNALVVDPKKQFRPLSK 529
GKT + L+ ++PG IGPEPTTDRF+ + F + V+ + L
Sbjct: 176 GKTTFIKHL-LKTNYPGAHIGPEPTTDRFVVITHFYQSLNVLRCLIQYIPSLALIILLHI 234
Query: 530 FGNAFLNRFQCSTV--TSDVLRGISIVDTPGILSGEKQRVDRGYDFTGVLEWFAERVDRI 703
F L + ++ + +L I+ VDTPG+LSGEKQR R YDFTGV WFA + D I
Sbjct: 235 FHYVALRKKLIVSIFYIAKLLDHITFVDTPGVLSGEKQRTQRSYDFTGVTSWFAAKCDLI 294
Query: 704 ILLFDAHKLDISDEFRRSIEALRGHDDKI 790
+LLFD HKLDISDEF+R I +L+GHDDKI
Sbjct: 295 LLLFDPHKLDISDEFKRVIGSLKGHDDKI 323
>07_03_0169 + 14670994-14673714,14673799-14673879,14675460-14675612,
14675910-14676073,14676162-14676309,14676426-14676548,
14676754-14676841,14677493-14677674
Length = 1219
Score = 34.7 bits (76), Expect = 0.085
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 488 LVVDPKKQFRPLSKFGNAFLNRFQCSTVTSDVLRGISIVDTPGILSGEKQRVDRGYD-FT 664
L+V+ K Q RP+ K G+ L++ + +T+ S +RG P +L+G +V D F+
Sbjct: 1076 LLVNLKDQSRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFS 1135
Query: 665 -GVLEW 679
G++ W
Sbjct: 1136 FGIVMW 1141
>04_04_0638 -
26877640-26877825,26877954-26878160,26878866-26878925,
26879229-26879435,26879501-26879549,26880138-26880337,
26880425-26880510,26880585-26880741,26880920-26881084,
26881817-26882053
Length = 517
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 344 HPHGKTDIYSGICLERDFPGIRIGPEPTTDRFIAVMFDEKEGVIPGNALVVDPKKQ 511
HP G D+Y+G+ +D+ G ++ TT+ F AV+ K V G+ V+D K +
Sbjct: 122 HPKGG-DVYAGV--PKDYTGHQV----TTENFFAVLLGNKTAVTGGSGKVIDSKPE 170
>06_03_0927 + 26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 488 LVVDPKKQFRPLSKFGNAFLNRFQCSTVTSDVLRGISIVDTPGILSGEKQRVDRGYD-FT 664
L+V+ + RP+ K G+ L++ +C T+ S +RG P +L+G V D F+
Sbjct: 973 LLVNLRDPQRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFS 1032
Query: 665 -GVLEW 679
G++ W
Sbjct: 1033 FGIVLW 1038
>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 488 LVVDPKKQFRPLSKFGNAFLNRFQCSTVTSDVLRGISIVDTPGILSGEKQRVDRGYD-FT 664
L+V+ + RP+ K G+ L+R + +T+ S +RG P +L+G RV D F+
Sbjct: 4034 LLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFS 4093
Query: 665 -GVLEW 679
G+ W
Sbjct: 4094 FGIALW 4099
>06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,
4022521-4022673,4022749-4022912,4022990-4023137,
4023530-4023652,4023774-4023861,4023951-4024129
Length = 1273
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +2
Query: 488 LVVDPKKQFRPLSKFGNAFLNRFQCSTVTSDVLRGISIVDTPGILSGEKQRVDRGYD-FT 664
L+V+ + P+ K G+ L++ +C T+ S +RG P +L+G V D F+
Sbjct: 1131 LLVNLRDPQHPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFS 1190
Query: 665 -GVLEW 679
G++ W
Sbjct: 1191 FGIVMW 1196
>02_05_0888 - 32517876-32518087,32518320-32518694,32519551-32519638,
32520145-32520384,32521033-32521149,32521213-32521606,
32521752-32521998,32522086-32522315,32522768-32522823,
32522903-32523094,32523274-32523376,32523478-32523544,
32524312-32525154,32525547-32525670,32525965-32526213,
32526354-32526443,32526530-32526649,32526664-32526738,
32527001-32527147,32527255-32527365,32527446-32527667,
32527777-32527896,32527971-32528270,32528355-32528480,
32529246-32529360,32529556-32530019,32530119-32530253,
32530684-32530788,32530876-32531053,32531143-32531864
Length = 2188
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 552 DSSVQLSRRTYYAGSLSLTHPVSYLERNSV*IAGMTL-LEYWNGLLSVLTES 704
DS+ QL Y +GSLSL H +Y +NSV G L +Y+ GL S+L ++
Sbjct: 1487 DSTAQLP--LYSSGSLSLNHWAAYFHQNSV---GTYLDCQYFAGLKSLLRKN 1533
>02_04_0162 -
20441621-20441646,20441919-20442000,20442313-20442411,
20443391-20443438
Length = 84
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 365 IYSGICLERDFPGIRIGPEPTTDRFIAVM 451
+ +G L G + PEPTTDRF+ +M
Sbjct: 21 LIAGSKLSLSIAGANVEPEPTTDRFVDIM 49
>04_04_0916 + 29390813-29391893,29402054-29402652
Length = 559
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 418 WTNTDARKISL*ANT*INVCFTVWMYLSPREVXLWVWLY---EIWSLSKLSANG 266
+T T A K L T N +W +PR+ + WL +W+ +L+ G
Sbjct: 377 YTATSAYKAQLLGTTATNFNILIWKPWAPRKCKTFAWLIIQNRVWTSDRLATRG 430
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 563 STVTSD--VLRGISIVDTPGILSGEKQRVDRGYDFTGVLEWFAERVDRIILLFDAHKLDI 736
ST D ++R I+++DTPG+ + + D + ++ + + ++++F A
Sbjct: 165 STTVQDGCLIRTINVIDTPGLFDMDIKAEDVRREIVKCMDMAKDGIHAMLMVFSATS-RF 223
Query: 737 SDEFRRSIEALRG-HDDKI 790
S E ++IE L+ DKI
Sbjct: 224 SCEDEKTIETLKSFFGDKI 242
>11_06_0541 + 24771145-24775479
Length = 1444
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 578 DVLRGISIVDTPGILSGEKQRVDRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRS 757
D + G++ IL ++ G DFT V ++ RVDR+ F +LD +
Sbjct: 359 DAMLGLTNKKPLCILLKALDYLEYGADFTDVRKYHELRVDRMPFQFQMLQLDEEKLLVAT 418
Query: 758 IEALRGH 778
+ L+GH
Sbjct: 419 AQKLKGH 425
>01_01_0898 +
7078900-7079079,7080269-7080301,7080480-7080653,
7080866-7083890,7084253-7084596
Length = 1251
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -1
Query: 525 LNGRNCFFGSTTNALPGITPSFSSNITAINLSVVGSGPIRMPGKSLSRQIPE*MSVLP 352
L+ + F ++ N L G PS SN++++ +++PG L+ IPE ++++P
Sbjct: 631 LSAQLSIFSASENKLTGGLPSSLSNLSSLE-------QLQLPGNQLTGPIPESITMMP 681
>01_06_0910 -
32922459-32922646,32922725-32922823,32923371-32923502,
32923585-32923743,32924553-32924711,32924897-32925052,
32925846-32926044
Length = 363
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 342 ICLHEKXIYGFGYTKSGVFRSCRRMXXFVD 253
+ L + +YGFG T+ G C R F D
Sbjct: 168 VLLKDNSVYGFGSTRRGQIGRCTRNQKFYD 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,743,361
Number of Sequences: 37544
Number of extensions: 395628
Number of successful extensions: 895
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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