Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0017
(575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 73 2e-13
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 70 2e-12
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 65 4e-11
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 62 2e-10
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 57 1e-08
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 50 2e-06
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 46 3e-05
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 45 5e-05
12_01_0763 + 6931678-6931911,6932161-6932172 37 0.010
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 29 2.0
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 29 3.5
03_05_0473 - 24670411-24671259 28 4.6
09_04_0500 - 18120287-18122233 28 6.1
05_07_0029 - 27163121-27163818,27163992-27164067,27164184-271658... 28 6.1
04_04_0933 + 29495656-29496972,29497244-29497819,29499414-294996... 28 6.1
02_02_0662 - 12736904-12737214,12737632-12737914 28 6.1
06_01_0368 + 2645007-2645317,2645422-2645509,2648927-2649183,264... 27 8.1
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 27 8.1
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 72.5 bits (170), Expect = 2e-13
Identities = 58/164 (35%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Frame = +1
Query: 124 RKYVVKNHFKGVSKQEDYELVEFV------IPPLIDGEVLVKAEWISVDPYLRA-YNSYQ 282
+K V++NH G K+ D ELV +P DG VLVK ++S DPY+R +S+
Sbjct: 6 KKIVLRNHVTGFPKESDMELVAATGAAPSRVPEGTDGAVLVKNLYLSCDPYMRGRMSSHD 65
Query: 283 AVPYDQF-------SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRI 441
D F Y VG VV S + G V GW ++ + P+ I
Sbjct: 66 GSYVDAFVVGEAITGYGVGKVVDSSHPGFKAGDLVWGMTGWEEYSLIK---DPSRALFAI 122
Query: 442 YKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
+ PDL S G +GM G TAY GF EIC P+ GE V V+
Sbjct: 123 -RHPDLP---LSYYTGLLGMAGFTAYVGFHEICAPREGERVYVS 162
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 69.7 bits (163), Expect = 2e-12
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Frame = +1
Query: 118 SARKYVVKNHFKGVSKQEDYELVEFVIPPLI----DGEVLVKAEWISVDPYLRAYNSYQA 285
S ++ ++K + G+ ++D E+V PPL V+VK ++S DPY+R ++
Sbjct: 7 SNKRVILKRYVTGLLSEDDMEVVTVEAPPLDVPTGSKGVVVKNLYVSCDPYMRNRMTHHE 66
Query: 286 VPYDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQG 465
+P + G V+ S ++ G V GW ++ V N P+ ++K+ +
Sbjct: 67 LPSYIPDFVPGEVISSGHLDFKAGDLVWGMTGWEEYTVI------NNPES-LFKINHPE- 118
Query: 466 LSPSLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
L S G +GMPG TAY GF ++ KPK GE V ++
Sbjct: 119 LPLSYYTGILGMPGLTAYAGFFDVPKPKKGEYVFIS 154
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 64.9 bits (151), Expect = 4e-11
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Frame = +1
Query: 121 ARKYVVKNHFKGVSKQEDYELVEFVIPPLID-GEVLVKAEWISVDPYL-----RAYNSYQ 282
+R V++H +G+ ++D+E+ + + GEVLV+ ++SVDPY R S+
Sbjct: 5 SRYVAVRHHVEGLPSEDDFEVKAARVRWWPESGEVLVRNLYLSVDPYQLNRMKRRSASHL 64
Query: 283 AV----PYDQF-SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYK 447
AV P ++ +Y G VV S Y G V GW D+ +F PS P + K
Sbjct: 65 AVDGIVPGERIDAYGAGEVVASACEEYKEGDVVAGVLGWEDYTLFRPS-----PGVLMSK 119
Query: 448 LPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
L L S + A+G G TAY G E+ +P+AGE V V+
Sbjct: 120 LAASDDLPLSHHLSALGTSGMTAYAGLYEVGRPEAGEKVFVS 161
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 62.5 bits (145), Expect = 2e-10
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Frame = +1
Query: 118 SARKYVVKNHFKGVSKQEDYELVEFVIPPLI-----DGEVLVKAEWISVDPYLRAYNSYQ 282
S ++ ++K + G+ ++D E+V +PPL V+VK ++S DPY+R +
Sbjct: 6 SNKRVILKRYVTGLLSEDDMEVVTTEVPPLAVVPAGSEAVVVKNLYVSCDPYMRNRMTRH 65
Query: 283 AVP--YDQF-------SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKD 435
VP F ++ V V+ S ++ G V GW ++ V N P+
Sbjct: 66 EVPSYVSDFIPGEVLANFGVMRVISSGHPDFKAGDLVWGITGWEEYTVI------NNPES 119
Query: 436 RIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
++++ + L S G +GMPG TAY GF E+ KPK GE V ++
Sbjct: 120 -LFRINHPK-LPLSYYTGILGMPGLTAYAGFFEVSKPKKGEYVFIS 163
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 56.8 bits (131), Expect = 1e-08
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Frame = +1
Query: 124 RKYVVKNHFKGVSKQEDYELVEF---VIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVPY 294
R+ ++K + G+ ++D E+V + P V+VK ++S DPY+R + VP
Sbjct: 8 RRVILKRYVTGLPSEDDMEVVTAKTTLAVPAGSEAVMVKNLYVSCDPYMRGRMTRHEVPS 67
Query: 295 DQFSYQVGVV---------VQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYK 447
Y G V V S ++ G V GW ++ T N PK ++K
Sbjct: 68 YVPDYVPGEVITNCGVMKVVSSGHPDFKDGDLVWGVTGWEEY------TLVNNPKPYLHK 121
Query: 448 LPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
+ + S G +G+ G TAY GF E+ KPK G+ V V+
Sbjct: 122 I-NYPEFPLSYYTGVLGIAGLTAYGGFFEVSKPKKGDYVFVS 162
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 49.6 bits (113), Expect = 2e-06
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Frame = +1
Query: 103 KVEMTSARKYVVKNHFK-GVSKQEDYELVEFVIPPLID-----GEVLVKAEWISVDPYLR 264
++EM RK V++ + G +D E+V + P + V+VK ++S DP++R
Sbjct: 10 EMEMVRNRKVVLRRYVTAGYPTVDDMEVVSSTMMPRVPLGTMAPAVMVKNIYLSCDPWMR 69
Query: 265 A----YNSYQAVPYDQF-------SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPS 411
++ A + F ++ V VV S + G V GW ++ + T
Sbjct: 70 GRMTKHDDATAEIAEDFVLGEAMVNFGVSKVVDSTHPVFAAGDLVWGLCGWEEYSLIT-- 127
Query: 412 TQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
QP T ++K+ + L S G +G+ G TAY F E+ KPK GETV V+
Sbjct: 128 -QPET----LHKI-NHPDLPLSYYTGVLGVTGLTAYAAFFEVGKPKKGETVFVS 175
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +1
Query: 322 VVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGM 501
V+ S ++ G V GW ++ V N P + ++K+ + L S G +GM
Sbjct: 3 VISSGHQDFKAGDLVWGITGWEEYTVI------NNP-ETLFKINHPE-LPLSYYTGILGM 54
Query: 502 PGATAYFGFLEICKPKAGETVVVT 573
PG TAY GF E+ KPK GE V ++
Sbjct: 55 PGLTAYGGFFEVAKPKKGEYVFIS 78
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1
Query: 475 SLGVGAVGMPGATAYFGFLEICKPKAGETVVVT 573
S +G +GMPG TAY GF EIC PK GE V V+
Sbjct: 166 SYHLGLLGMPGFTAYAGFYEICSPKKGEFVFVS 198
>12_01_0763 + 6931678-6931911,6932161-6932172
Length = 81
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 112 MTSARKYVVKNHFKGVSKQEDYELVEFVIPPLI----DGEVLVKAEWISVDPYLRAYNSY 279
+ S ++ ++K + G+ ++D E+V PPL V+VK +IS DPY+R +Y
Sbjct: 5 VVSNKRVILKRYVTGLVSEDDMEVVTVEAPPLAVPAGSKTVVVKNLYISCDPYMRNRMTY 64
Query: 280 QAVP 291
P
Sbjct: 65 HEEP 68
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 496 GMPGATAYFGFLEICKPK 549
GM G TAY GF E+ KPK
Sbjct: 6 GMHGLTAYVGFFEMSKPK 23
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 331 SRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPK 432
SRD+N+P+GT H DH PS P P+
Sbjct: 402 SRDANHPIGTPPSNHSALADH----PSKPPPGPR 431
>03_05_0473 - 24670411-24671259
Length = 282
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 575 PVTTTVSPAFGLQISKKPK*AVAPGIPTAPTPSDGDN 465
P+TT+ S + G +P A +P AP P+ GD+
Sbjct: 65 PITTSSSSSHGHDDVDEPALLAAAVVPAAPPPAAGDD 101
>09_04_0500 - 18120287-18122233
Length = 648
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 418 PNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAY 519
PN PK + K L GL S+ VG G+ AY
Sbjct: 185 PNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAY 218
>05_07_0029 -
27163121-27163818,27163992-27164067,27164184-27165896,
27166285-27166364,27166516-27166684
Length = 911
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 73 ACDKKTQGPTKVEMTSARKYVVKNHFKGVSKQEDYELVEFVIPPLIDGEVLVKAEWISVD 252
+C K+ ++S R+ V+ +G+S E E V F L + E+L S+
Sbjct: 547 SCPKRDYRRDCQNISSERELVLSEALQGISSLESAESVCFNRNELRNREILDDRVMSSLF 606
Query: 253 PYLRAYNSYQAVPYDQFSYQ 312
A N + P D+F +Q
Sbjct: 607 RKTSAINVMEESPSDEFLWQ 626
>04_04_0933 +
29495656-29496972,29497244-29497819,29499414-29499650,
29499736-29500048,29500191-29500300
Length = 850
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 568 PPRS--RQLLACRFLRNQNRQSRPASQPPLRPATATIP 461
PP S R LLA RN R+ P S PP P T ++P
Sbjct: 4 PPSSLLRDLLAADGFRN--RRKPPDSNPPAAPRTTSMP 39
>02_02_0662 - 12736904-12737214,12737632-12737914
Length = 197
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 403 TPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMP 504
+P +P K YK LSPSL V AVG+P
Sbjct: 18 SPLPEPPPAKPGSYKHGGSGALSPSLAVKAVGVP 51
>06_01_0368 +
2645007-2645317,2645422-2645509,2648927-2649183,
2649453-2649504,2649527-2649838
Length = 339
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 523 QNRQSRPASQPPLRPATATIPADLVVYKYD 434
Q + P++ PP AT +P+D + Y D
Sbjct: 291 QTQDQPPSTPPPDTRATRAVPSDCITYSQD 320
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 511 SRPASQPPLRPATATIPADLVVYKYDPLE 425
+RPA QPP P T +P ++++ P +
Sbjct: 725 ARPAQQPPRPPVTQPLPPPPPLHQHQPYQ 753
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,263,183
Number of Sequences: 37544
Number of extensions: 347541
Number of successful extensions: 1076
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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