Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0017
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D49387-1|BAA08382.1| 311|Homo sapiens NADP dependent leukotrien... 104 2e-22
BC035228-1|AAH35228.1| 329|Homo sapiens leukotriene B4 12-hydro... 104 2e-22
AL135787-3|CAC22151.1| 329|Homo sapiens leukotriene B4 12-hydro... 104 2e-22
AL135787-4|CAI12402.1| 119|Homo sapiens leukotriene B4 12-hydro... 80 6e-15
AL135787-5|CAC22152.1| 70|Homo sapiens leukotriene B4 12-hydro... 50 6e-06
AL135787-2|CAI12401.1| 177|Homo sapiens leukotriene B4 12-hydro... 42 0.002
L31526-1|AAK40311.1| 329|Homo sapiens zeta-crystallin protein. 38 0.025
L13278-1|AAA36536.1| 329|Homo sapiens zeta-crystallin protein. 38 0.025
BC039578-1|AAH39578.1| 329|Homo sapiens crystallin, zeta (quino... 38 0.025
AK223201-1|BAD96921.1| 329|Homo sapiens crystallin, zeta varian... 38 0.025
AK223150-1|BAD96870.1| 329|Homo sapiens crystallin, zeta varian... 38 0.025
AB209714-1|BAD92951.1| 331|Homo sapiens crystallin, zeta varian... 38 0.025
BX641118-1|CAE46055.1| 180|Homo sapiens hypothetical protein pr... 36 0.077
BC059364-1|AAH59364.1| 351|Homo sapiens zinc binding alcohol de... 36 0.077
AY424308-1|AAR82927.1| 351|Homo sapiens zinc binding alcohol de... 36 0.077
AY346133-1|AAR05101.1| 351|Homo sapiens zinc binding alcohol de... 36 0.077
AK096410-1|BAC04781.1| 351|Homo sapiens protein ( Homo sapiens ... 36 0.077
BC070058-1|AAH70058.1| 329|Homo sapiens CRYZ protein protein. 35 0.24
BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for IM... 30 6.7
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 30 6.7
AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alp... 30 6.7
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alp... 30 6.7
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alp... 30 6.7
>D49387-1|BAA08382.1| 311|Homo sapiens NADP dependent leukotriene
b4 12-hydroxydehydrogenase protein.
Length = 311
Score = 104 bits (250), Expect = 2e-22
Identities = 60/153 (39%), Positives = 83/153 (54%)
Frame = +1
Query: 112 MTSARKYVVKNHFKGVSKQEDYELVEFVIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVP 291
M + + +K HF G D+EL +PPL +GEVL++A +++VDPY+R
Sbjct: 1 MVRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGEVLLEALFLTVDPYMRVAAKRLKEG 60
Query: 292 YDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLS 471
QV VV+S++ P GT V+A GW H + + + + + PD LS
Sbjct: 61 DTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSI----SDGKDLEKLLTEWPDTIPLS 116
Query: 472 PSLGVGAVGMPGATAYFGFLEICKPKAGETVVV 570
L +G VGMPG TAYFG LEIC K GETV+V
Sbjct: 117 --LALGTVGMPGLTAYFGLLEICGVKGGETVMV 147
>BC035228-1|AAH35228.1| 329|Homo sapiens leukotriene B4
12-hydroxydehydrogenase protein.
Length = 329
Score = 104 bits (250), Expect = 2e-22
Identities = 60/153 (39%), Positives = 83/153 (54%)
Frame = +1
Query: 112 MTSARKYVVKNHFKGVSKQEDYELVEFVIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVP 291
M + + +K HF G D+EL +PPL +GEVL++A +++VDPY+R
Sbjct: 1 MVRTKTWTLKKHFVGYPTNSDFELKTSELPPLKNGEVLLEALFLTVDPYMRVAAKRLKEG 60
Query: 292 YDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLS 471
QV VV+S++ P GT V+A GW H + + + + + PD LS
Sbjct: 61 DTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSI----SDGKDLEKLLTEWPDTIPLS 116
Query: 472 PSLGVGAVGMPGATAYFGFLEICKPKAGETVVV 570
L +G VGMPG TAYFG LEIC K GETV+V
Sbjct: 117 --LALGTVGMPGLTAYFGLLEICGVKGGETVMV 147
>AL135787-3|CAC22151.1| 329|Homo sapiens leukotriene B4
12-hydroxydehydrogenase protein.
Length = 329
Score = 104 bits (250), Expect = 2e-22
Identities = 60/153 (39%), Positives = 83/153 (54%)
Frame = +1
Query: 112 MTSARKYVVKNHFKGVSKQEDYELVEFVIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVP 291
M + + +K HF G D+EL +PPL +GEVL++A +++VDPY+R
Sbjct: 1 MVRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGEVLLEALFLTVDPYMRVAAKRLKEG 60
Query: 292 YDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLS 471
QV VV+S++ P GT V+A GW H + + + + + PD LS
Sbjct: 61 DTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSI----SDGKDLEKLLTEWPDTIPLS 116
Query: 472 PSLGVGAVGMPGATAYFGFLEICKPKAGETVVV 570
L +G VGMPG TAYFG LEIC K GETV+V
Sbjct: 117 --LALGTVGMPGLTAYFGLLEICGVKGGETVMV 147
>AL135787-4|CAI12402.1| 119|Homo sapiens leukotriene B4
12-hydroxydehydrogenase protein.
Length = 119
Score = 79.8 bits (188), Expect = 6e-15
Identities = 52/143 (36%), Positives = 74/143 (51%)
Frame = +1
Query: 112 MTSARKYVVKNHFKGVSKQEDYELVEFVIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVP 291
M + + +K HF G D+EL +PPL +GEVL++A +++VDPY+R
Sbjct: 1 MVRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGEVLLEALFLTVDPYMR--------- 51
Query: 292 YDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLS 471
VV+S++ P GT V+A GW H + + + + + PD LS
Sbjct: 52 ----------VVESKNVALPKGTIVLASPGWTTHSI----SDGKDLEKLLTEWPDTIPLS 97
Query: 472 PSLGVGAVGMPGATAYFGFLEIC 540
L +G VGMPG TAYFG LEIC
Sbjct: 98 --LALGTVGMPGLTAYFGLLEIC 118
>AL135787-5|CAC22152.1| 70|Homo sapiens leukotriene B4
12-hydroxydehydrogenase protein.
Length = 70
Score = 50.0 bits (114), Expect = 6e-06
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +1
Query: 112 MTSARKYVVKNHFKGVSKQEDYELVEFVIPPLIDGEVLVKAEWISVDPYLR 264
M + + +K HF G D+EL +PPL +GEVL++A +++VDPY+R
Sbjct: 1 MVRTKTWTLKKHFVGYPTNSDFELKTAELPPLKNGEVLLEALFLTVDPYMR 51
>AL135787-2|CAI12401.1| 177|Homo sapiens leukotriene B4
12-hydroxydehydrogenase protein.
Length = 177
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 499 MPGATAYFGFLEICKPKAGETVVV 570
MPG TAYFG LEIC K GETV+V
Sbjct: 1 MPGLTAYFGLLEICGVKGGETVMV 24
>L31526-1|AAK40311.1| 329|Homo sapiens zeta-crystallin protein.
Length = 329
Score = 37.9 bits (84), Expect = 0.025
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ +PY S GV+ V S
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 87 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 139
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 140 LIHSACVKAGESVLV 154
>L13278-1|AAA36536.1| 329|Homo sapiens zeta-crystallin protein.
Length = 329
Score = 37.9 bits (84), Expect = 0.025
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ +PY S GV+ V S
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 87 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 139
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 140 LIHSACVKAGESVLV 154
>BC039578-1|AAH39578.1| 329|Homo sapiens crystallin, zeta (quinone
reductase) protein.
Length = 329
Score = 37.9 bits (84), Expect = 0.025
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ +PY S GV+ V S
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 87 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 139
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 140 LIHSACVKAGESVLV 154
>AK223201-1|BAD96921.1| 329|Homo sapiens crystallin, zeta variant
protein.
Length = 329
Score = 37.9 bits (84), Expect = 0.025
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ +PY S GV+ V S
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 87 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 139
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 140 LIHSACVKAGESVLV 154
>AK223150-1|BAD96870.1| 329|Homo sapiens crystallin, zeta variant
protein.
Length = 329
Score = 37.9 bits (84), Expect = 0.025
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ +PY S GV+ V S
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 86
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 87 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 139
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 140 LIHSACVKAGESVLV 154
>AB209714-1|BAD92951.1| 331|Homo sapiens crystallin, zeta variant
protein.
Length = 331
Score = 37.9 bits (84), Expect = 0.025
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ +PY S GV+ V S
Sbjct: 29 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 88
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 89 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 141
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 142 LIHSACVKAGESVLV 156
>BX641118-1|CAE46055.1| 180|Homo sapiens hypothetical protein
protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.077
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 169 EDYELVEFVIPPLI-DGEVLVKAEWISVDPYLRA-YNSYQAVPYD---QFSYQV-----G 318
E++ + E +P I +G+V V+ ++SVDPY+R N Y Q S V G
Sbjct: 21 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIG 80
Query: 319 VVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKL-PDLQGLSPSLGVGAV 495
++ +S+ +N G V + + + T+ + + K+ P L S +GA+
Sbjct: 81 IIEESKHTNLTKGDFVTS-------FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAI 133
Query: 496 GMPGATAYFGFLEICKPKAG--ETVVVT 573
GMPG T+ G E AG +T+VV+
Sbjct: 134 GMPGLTSLIGIQEKGHITAGSNKTMVVS 161
>BC059364-1|AAH59364.1| 351|Homo sapiens zinc binding alcohol
dehydrogenase, domain containing 1 protein.
Length = 351
Score = 36.3 bits (80), Expect = 0.077
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 169 EDYELVEFVIPPLI-DGEVLVKAEWISVDPYLRA-YNSYQAVPYD---QFSYQV-----G 318
E++ + E +P I +G+V V+ ++SVDPY+R N Y Q S V G
Sbjct: 21 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIG 80
Query: 319 VVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKL-PDLQGLSPSLGVGAV 495
++ +S+ +N G V + + + T+ + + K+ P L S +GA+
Sbjct: 81 IIEESKHTNLTKGDFVTS-------FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAI 133
Query: 496 GMPGATAYFGFLEICKPKAG--ETVVVT 573
GMPG T+ G E AG +T+VV+
Sbjct: 134 GMPGLTSLIGIQEKGHITAGSNKTMVVS 161
>AY424308-1|AAR82927.1| 351|Homo sapiens zinc binding alcohol
dehydrogenase protein.
Length = 351
Score = 36.3 bits (80), Expect = 0.077
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 169 EDYELVEFVIPPLI-DGEVLVKAEWISVDPYLRA-YNSYQAVPYD---QFSYQV-----G 318
E++ + E +P I +G+V V+ ++SVDPY+R N Y Q S V G
Sbjct: 21 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIG 80
Query: 319 VVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKL-PDLQGLSPSLGVGAV 495
++ +S+ +N G V + + + T+ + + K+ P L S +GA+
Sbjct: 81 IIEESKHTNLTKGDFVTS-------FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAI 133
Query: 496 GMPGATAYFGFLEICKPKAG--ETVVVT 573
GMPG T+ G E AG +T+VV+
Sbjct: 134 GMPGLTSLIGIQEKGHITAGSNKTMVVS 161
>AY346133-1|AAR05101.1| 351|Homo sapiens zinc binding alcohol
dehydrogenase domain containing 1 protein protein.
Length = 351
Score = 36.3 bits (80), Expect = 0.077
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 169 EDYELVEFVIPPLI-DGEVLVKAEWISVDPYLRA-YNSYQAVPYD---QFSYQV-----G 318
E++ + E +P I +G+V V+ ++SVDPY+R N Y Q S V G
Sbjct: 21 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIG 80
Query: 319 VVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKL-PDLQGLSPSLGVGAV 495
++ +S+ +N G V + + + T+ + + K+ P L S +GA+
Sbjct: 81 IIEESKHTNLTKGDFVTS-------FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAI 133
Query: 496 GMPGATAYFGFLEICKPKAG--ETVVVT 573
GMPG T+ G E AG +T+VV+
Sbjct: 134 GMPGLTSLIGIQEKGHITAGSNKTMVVS 161
>AK096410-1|BAC04781.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ39091 fis, clone NT2RP7019543, weakly similar to
NADP-DEPENDENT OXIDOREDUCTASE IN TEHB-RHSE INTERGENIC
REGION ).
Length = 351
Score = 36.3 bits (80), Expect = 0.077
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Frame = +1
Query: 169 EDYELVEFVIPPLI-DGEVLVKAEWISVDPYLRA-YNSYQAVPYD---QFSYQV-----G 318
E++ + E +P I +G+V V+ ++SVDPY+R N Y Q S V G
Sbjct: 21 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIG 80
Query: 319 VVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKL-PDLQGLSPSLGVGAV 495
++ +S+ +N G V + + + T+ + + K+ P L S +GA+
Sbjct: 81 IIEESKHTNLTKGDFVTS-------FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAI 133
Query: 496 GMPGATAYFGFLEICKPKAG--ETVVVT 573
GMPG T+ G E AG +T+VV+
Sbjct: 134 GMPGLTSLIGIQEKGHITAGSNKTMVVS 161
>BC070058-1|AAH70058.1| 329|Homo sapiens CRYZ protein protein.
Length = 329
Score = 34.7 bits (76), Expect = 0.24
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Frame = +1
Query: 187 EFVIPPLIDGEVLVKAEWISVDP---YLRA--YNSYQAVPYDQFSYQVGVV--VQSRDSN 345
+ +P D +VL+K V+P Y+R+ Y+ + Y S GV+ V S
Sbjct: 27 DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLSYTPGSDVAGVIEAVGDNASA 86
Query: 346 YPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFG 525
+ G RV Y +T +YKLP+ A+G+P TAY
Sbjct: 87 FKKGDRVFTSSTISGGYAEYALAADHT----VYKLPEKLDFKQG---AAIGIPYFTAYRA 139
Query: 526 FLEICKPKAGETVVV 570
+ KAGE+V+V
Sbjct: 140 LIHSACVKAGESVLV 154
>BC080610-1|AAH80610.1| 466|Homo sapiens Unknown (protein for
IMAGE:5480483) protein.
Length = 466
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 566 TTVSPAFG-LQISKKPK*AVAPGIPTAPTPSDGDNP 462
TT +PA G L + P+ VAP PT P + NP
Sbjct: 36 TTATPALGSLPAGRGPRGTVAPATPTKPQRTSPTNP 71
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 566 TTVSPAFG-LQISKKPK*AVAPGIPTAPTPSDGDNP 462
TT +PA G L + P+ VAP PT P + NP
Sbjct: 273 TTATPALGSLPAGRGPRGTVAPATPTKPQRTSPTNP 308
>AL445543-2|CAI14773.1| 714|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 714
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 566 TTVSPAFG-LQISKKPK*AVAPGIPTAPTPSDGDNP 462
TT +PA G L + P+ VAP PT P + NP
Sbjct: 220 TTATPALGSLPAGRGPRGTVAPATPTKPQRTSPTNP 255
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 566 TTVSPAFG-LQISKKPK*AVAPGIPTAPTPSDGDNP 462
TT +PA G L + P+ VAP PT P + NP
Sbjct: 273 TTATPALGSLPAGRGPRGTVAPATPTKPQRTSPTNP 308
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen type XXVII alpha
1 protein.
Length = 1860
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 566 TTVSPAFG-LQISKKPK*AVAPGIPTAPTPSDGDNP 462
TT +PA G L + P+ VAP PT P + NP
Sbjct: 273 TTATPALGSLPAGRGPRGTVAPATPTKPQRTSPTNP 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,786,738
Number of Sequences: 237096
Number of extensions: 1926306
Number of successful extensions: 4441
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4433
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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