Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0016
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69787-12|CAM84810.1|  234|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z69787-7|CAA93643.1|  214|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81479-10|CAB03945.2|  324|Caenorhabditis elegans Hypothetical p...    27   7.8  
U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant respons...    27   7.8  
AY552606-1|AAS89253.1|  324|Caenorhabditis elegans heparan sulfa...    27   7.8  

>Z69787-12|CAM84810.1|  234|Caenorhabditis elegans Hypothetical
           protein C44C10.9b protein.
          Length = 234

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 263 LLEGQAKGVKTCKFSSIKIDLEKEIGGYEFTCDIDIE 373
           L EG  K  K C F   + D+E +   YEF CD D+E
Sbjct: 13  LYEGYTKAFKQCIFE--EGDVEGKNERYEFRCDYDLE 47


>Z69787-7|CAA93643.1|  214|Caenorhabditis elegans Hypothetical
           protein C44C10.9a protein.
          Length = 214

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 263 LLEGQAKGVKTCKFSSIKIDLEKEIGGYEFTCDIDIE 373
           L EG  K  K C F   + D+E +   YEF CD D+E
Sbjct: 13  LYEGYTKAFKQCIFE--EGDVEGKNERYEFRCDYDLE 47


>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
           protein H08M01.2b protein.
          Length = 1341

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 104 KCSLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVL 244
           KC    EEC K+ +N   +      I    +PPV+  ++KNV+V  L
Sbjct: 206 KCDEASEECKKNYLNLFYSTKELKHIMS-HVPPVETSSVKNVNVEYL 251


>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
           protein H08M01.2a protein.
          Length = 1320

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 104 KCSLKDEECTKSLINNALNEISSTGIPELDIPPVDPIALKNVSVTVL 244
           KC    EEC K+ +N   +      I    +PPV+  ++KNV+V  L
Sbjct: 206 KCDEASEECKKNYLNLFYSTKELKHIMS-HVPPVETSSVKNVNVEYL 251


>Z81479-10|CAB03945.2|  324|Caenorhabditis elegans Hypothetical
           protein C34F6.4 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 260 TLLEGQAKGVKTCKFSSIKIDLEKEIGGYEFTCDIDIEGKYKVFSESPLIKNLLGGTT 433
           T  E  ++G K C    + I +    G Y F  ++      +V  ++ L K LL GTT
Sbjct: 163 TFDECYSRGGKDCDMKQMWIQIPYFCGHYHFCTEVGNPEALRVAKQNVLEKYLLVGTT 220


>U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform b protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 146 NNALNEISSTGIPELDIPPVDPIALKNVSVTVLGLVDITLLEGQAKGVKTCKF 304
           N   ++ ++T  PEL +  VDP  +K V+ +++ L D+ L E   K  K  +F
Sbjct: 4   NRRKSKTTATSHPELHLEKVDP--MKTVTESMI-LFDVQLQEWVTKSAKNHEF 53


>AY552606-1|AAS89253.1|  324|Caenorhabditis elegans heparan sulfate
           2O-sulfotransferase protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +2

Query: 260 TLLEGQAKGVKTCKFSSIKIDLEKEIGGYEFTCDIDIEGKYKVFSESPLIKNLLGGTT 433
           T  E  ++G K C    + I +    G Y F  ++      +V  ++ L K LL GTT
Sbjct: 163 TFDECYSRGGKDCDMKQMWIQIPYFCGHYHFCTEVGNPEALRVAKQNVLEKYLLVGTT 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,454,070
Number of Sequences: 27780
Number of extensions: 280430
Number of successful extensions: 816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)