Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0014
         (579 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TCJ4 Cluster: Predicted protein; n=1; Nematostella ve...    33   4.9  
UniRef50_Q0TCJ1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.5  

>UniRef50_A7TCJ4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 214

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 229 PTNFCYIFKLNCISYYRKKWTRHLNNYLFNFFQHRNVIIIMYRL 98
           P N  YI     I  ++    R L+++L NF+   NVI I YRL
Sbjct: 11  PPNTAYIHHYTNIGCFQDNGRRALSHHLGNFYGKSNVIAICYRL 54


>UniRef50_Q0TCJ1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli 536|Rep: Putative uncharacterized
           protein - Escherichia coli O6:K15:H31 (strain 536 /
           UPEC)
          Length = 69

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 314 RFLCLKIVCIN*HTNEFSSKLY--NFIGINYFYEFWELQLRCH 436
           R +C K  C+N    ++SS  Y  +F+ +   YE+W L+   H
Sbjct: 13  RVICPKRQCVNSQKEKYSSLSYKLSFVDVRNSYEYWRLKAHKH 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,304,428
Number of Sequences: 1657284
Number of extensions: 7984692
Number of successful extensions: 15493
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15492
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)