Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0010
(304 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 66 7e-12
02_05_1184 + 34802749-34802892,34802981-34803220,34803636-348039... 51 2e-07
09_02_0462 + 9583558-9584910 38 0.002
07_03_0898 - 22403337-22404950 29 0.53
01_05_0268 - 20251413-20251565,20252420-20252674,20252905-202530... 29 0.53
08_02_1448 - 27168389-27172021 28 1.2
05_03_0459 - 14284513-14286336 28 1.2
11_06_0309 + 22265906-22266929,22267451-22267629,22267966-222681... 28 1.6
05_05_0047 + 21860127-21860735,21862600-21863451 28 1.6
06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458 27 2.8
05_06_0060 - 25266735-25267210,25267323-25267569,25267650-252683... 27 3.7
03_02_0158 - 6020682-6020796,6021112-6021329,6021548-6021589,602... 27 3.7
01_06_0529 - 30026101-30026277,30026363-30026438,30026509-300265... 27 3.7
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912... 26 4.9
11_05_0052 + 18683077-18683385 26 4.9
11_06_0339 - 22488214-22488254,22488339-22488829,22490233-224904... 26 6.5
06_03_0381 - 20106714-20107088,20107177-20107594,20107721-201079... 26 6.5
03_05_0603 - 26046145-26046273,26046400-26046459,26046820-260468... 26 6.5
12_02_0988 - 25064023-25064327,25064425-25064575,25064995-250652... 25 8.6
12_01_0150 + 1155658-1156087,1156319-1156383,1156506-1156569,115... 25 8.6
11_03_0093 - 9852075-9852871,9852911-9853009,9853208-9853646,985... 25 8.6
01_05_0510 - 22816607-22816916,22817005-22817177,22817341-228176... 25 8.6
>11_04_0007 -
12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 65.7 bits (153), Expect = 7e-12
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 10 RAELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189
R EL L+ KVQ CYE+ M+ F +++ LY VL+E+ IL W++ S+ KG+ F+
Sbjct: 401 RLELELIYKVQTQCYEDAKLMKLFPEIIRTLYDQDVLAEDTILLWFRKGSNPKGRQSFVK 460
Query: 190 QMKKFVDWLQ 219
++ FV WL+
Sbjct: 461 ALEPFVKWLE 470
>02_05_1184 +
34802749-34802892,34802981-34803220,34803636-34803950,
34804030-34804209,34804312-34804504,34805062-34805324,
34805461-34805590,34805719-34805786,34805951-34806199,
34806284-34806357,34808052-34808143,34808603-34808685,
34810337-34810408,34810558-34810683,34810996-34811037
Length = 756
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 16 ELALLTKVQEYCYENMS-FMRAFSKLVVMLYKTSVLSEEVILKWYKD-TSSSKGKVMFLD 189
E+ +L K +E C EN F FSK++ LY V+SE+ IL+W ++ ++ + +F+
Sbjct: 677 EMEILLKFEEMCQENTKEFSPLFSKILPYLYDKEVVSEDAILRWAEEKENADESDKVFVK 736
Query: 190 QMKKFVDWLQ 219
Q + F+ WL+
Sbjct: 737 QSEAFIQWLK 746
>09_02_0462 + 9583558-9584910
Length = 450
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 100 LYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFVDWLQN 222
LY VL EEVI +WY ++ + + + K FV+WLQ+
Sbjct: 402 LYDGDVLDEEVITQWYNESVAGGKESQVVKNAKPFVEWLQS 442
>07_03_0898 - 22403337-22404950
Length = 537
Score = 29.5 bits (63), Expect = 0.53
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 46 YCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMF 183
+ Y + F+ F + +V VLS E++ KW+++T S G V+F
Sbjct: 172 WVYAALRFVSGFGRSMVGT-SAMVLSTELVGKWWRNTVSVAGFVLF 216
>01_05_0268 -
20251413-20251565,20252420-20252674,20252905-20253055,
20253161-20253398,20253966-20254067,20254382-20254611,
20255599-20255724,20256056-20256828
Length = 675
Score = 29.5 bits (63), Expect = 0.53
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 188 SRNMTLPLEELVSLYHLRITSSERTLVLYSI 96
S +MTLP + + YH+R+T E + V+ I
Sbjct: 597 SESMTLPEPKYPAFYHMRVTKEEPSTVIMEI 627
>08_02_1448 - 27168389-27172021
Length = 1210
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = -2
Query: 261 LIFFFSALRLLFSILEPVYKLLHLVKEHDLALGRTSVFVPLEDHLLREDARLVQHYHQLT 82
L+F + + L ++LE + KL+ + E L++ RT L+ L+ + + +
Sbjct: 110 LLFRVTMSKKLSNVLEKMNKLVDKMNELGLSVDRTESPQELKPPYLQMHSAALDESSDIV 169
Query: 81 ERAHEAHVLVAVLLD 37
R + V+V +LLD
Sbjct: 170 GRDDDKEVVVKLLLD 184
>05_03_0459 - 14284513-14286336
Length = 607
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 90 QLTERAHEAHVLVAVLLDLSEQGELCPRAR 1
+LTE+ H H +VA LLD +E + RA+
Sbjct: 7 RLTEQIHSEHQVVAALLDKAEALVMAARAK 36
>11_06_0309 +
22265906-22266929,22267451-22267629,22267966-22268179,
22268273-22268510,22268617-22268767,22268934-22269158
Length = 676
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 188 SRNMTLPLEELVSLYHLRITSSERTLVLYS 99
S NMTLP + +H+R+T E + L S
Sbjct: 633 SENMTLPKPNHPAYFHIRVTKEEASTALES 662
>05_05_0047 + 21860127-21860735,21862600-21863451
Length = 486
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 3 GHEGRARPAH*GPGVLLREHELHARVQ*AGGNAVQDERPLGGGD 134
G +GRA PGVL+REH+ +A V+ G+A+ D +G GD
Sbjct: 152 GEDGRATGFVAKPGVLIREHKRNAVVR-EFGDALPD---VGMGD 191
>06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458
Length = 1217
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 206 TNFFIWSRNMTLPLEELVSLYHLRITSSERTLVLYSITTS 87
T+ I+ R + LP E L +Y RIT+S LVL+++ S
Sbjct: 1160 TSVVIFGRVVCLP-EPLYYIYFNRITTSHILLVLFNLPVS 1198
>05_06_0060 -
25266735-25267210,25267323-25267569,25267650-25268345,
25268457-25268709,25268786-25269261,25270760-25270909
Length = 765
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 6 HEGRARPAH*GPGVLLRE-HELHARVQ*AGGNAVQDE--RPLGGG 131
H R P +L+ H H R + AGGN V DE PL GG
Sbjct: 64 HAAPRRVPRCAPKMLVASRHGAHPRRRRAGGNGVADELALPLAGG 108
>03_02_0158 -
6020682-6020796,6021112-6021329,6021548-6021589,
6021680-6021721,6021929-6022028,6022149-6022210,
6022981-6023052
Length = 216
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 183 EHDLALGRTSVFVPLEDHLLREDARLVQHYHQLTERAHEAHV 58
+H L +G +S F+P+ + L E +Q YH H+A++
Sbjct: 152 DHSLQIGYSS-FLPVTVNFLPEKIPKMQRYHHPHAHHHQAYM 192
>01_06_0529 -
30026101-30026277,30026363-30026438,30026509-30026570,
30026882-30027031,30027213-30027338,30028096-30028305,
30028870-30028938,30029024-30029080,30029131-30029277,
30029358-30029542,30029623-30029698,30029796-30029918,
30030395-30030410,30031743-30032745,30033521-30033789,
30034297-30034415
Length = 954
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 183 EHDLALGRTSVFVPLEDHLLREDARLVQHYHQLTERAHEAHVLV 52
E L G+TS F P LL++ + + +HQ + H+ V
Sbjct: 324 EASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQV 367
>12_02_0648 +
21490202-21490296,21490547-21490634,21491216-21491260,
21491355-21491387,21491480-21491557,21491647-21491690,
21491765-21491805,21492102-21492184,21492261-21492352,
21492468-21492537,21492838-21492876,21493670-21493687,
21494586-21494713,21495235-21495358,21495585-21495716,
21496092-21496223,21496582-21496665
Length = 441
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 91 VVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMKKFV 207
+++L+ S + + I+ W+ SSS +M + M FV
Sbjct: 295 IILLFSASTIVQSSIVNWFSVHSSSGTILMIMTCMHPFV 333
>11_05_0052 + 18683077-18683385
Length = 102
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +3
Query: 18 ARPAH*GPGVLLREHELHARVQ*AGGNAVQDERPLGGGDPQVVQRH*FFQGQGHV 182
A PA G G H A GG +Q R G DP V R G G V
Sbjct: 4 AGPAVVGKGAAAALHGRCAEFG-GGGGGIQRRRRTGAADPTTVMRRGGGSGDGEV 57
>11_06_0339 -
22488214-22488254,22488339-22488829,22490233-22490405,
22492232-22492287,22492814-22492997,22494045-22494078,
22494326-22494390,22494710-22494843,22495066-22495201
Length = 437
Score = 25.8 bits (54), Expect = 6.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 120 EDARLVQHYHQLTERAHE 67
ED ++++HYH L R H+
Sbjct: 404 EDHQIIEHYHALRTRKHK 421
>06_03_0381 -
20106714-20107088,20107177-20107594,20107721-20107970,
20108109-20108169,20108346-20108422,20108557-20109007
Length = 543
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 159 TSVFVPLEDHLLREDARLVQHYHQLTERAHEAHV 58
+SVF P+E H+ R D R H+ +RA A V
Sbjct: 195 SSVFSPMEFHMRRGDHRF-HHHDMFFQRAAAAGV 227
>03_05_0603 -
26046145-26046273,26046400-26046459,26046820-26046895,
26046988-26047109,26047286-26047360,26047466-26047536,
26048102-26048129,26048625-26048738
Length = 224
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 52 YENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSS-SKGKVMFLDQMKKFVDWL 216
Y +S F +V++ +T+ + E+ L+W+ DT+ K ++ + FV WL
Sbjct: 109 YTMLSGEGQFYTYMVLISETT--TPEINLRWFLDTAGLKKSSAYLVNGILMFVAWL 162
>12_02_0988 -
25064023-25064327,25064425-25064575,25064995-25065259,
25065640-25065836
Length = 305
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 133 SPPPRGRSSCTALPPA 86
SPPPR R +LPPA
Sbjct: 26 SPPPRSRGRRPSLPPA 41
>12_01_0150 +
1155658-1156087,1156319-1156383,1156506-1156569,
1156988-1157115
Length = 228
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 133 SPPPRGRSSCTALPP 89
SP PR SSC +LPP
Sbjct: 63 SPTPRRPSSCLSLPP 77
>11_03_0093 -
9852075-9852871,9852911-9853009,9853208-9853646,
9853803-9854129
Length = 553
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -2
Query: 198 LHLVKEHDLALGRTSVFVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19
+H VKE +L + + L HL + R Q+T +A ++HV V ++ G
Sbjct: 168 MHTVKEIELLATKLDL---LRKHLDDDKKR-----PQVTVKALDSHVTYEVCSNMGHSGN 219
Query: 18 LCPRAR 1
CP R
Sbjct: 220 DCPETR 225
>01_05_0510 -
22816607-22816916,22817005-22817177,22817341-22817607,
22817951-22818393,22818474-22818635,22820991-22821414,
22823177-22823227
Length = 609
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 172 CPWKN*CLCTT*GSPPPRGRSSCTALP 92
C W+ T G+P PRG CT P
Sbjct: 22 CQWRKYGQKTAKGNPWPRGYYRCTGAP 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,203,158
Number of Sequences: 37544
Number of extensions: 139854
Number of successful extensions: 407
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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