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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0010
         (304 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20)                   101   1e-22
SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)                      38   0.001
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)                    30   0.31 
SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.95 
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   2.2  
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)                27   2.9  
SB_9286| Best HMM Match : DUF240 (HMM E-Value=1)                       27   2.9  
SB_13659| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00051)          27   3.9  
SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.1  
SB_15488| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00019)          26   5.1  
SB_21071| Best HMM Match : efhand (HMM E-Value=0.48)                   26   6.7  
SB_58593| Best HMM Match : W2 (HMM E-Value=0.0069)                     25   8.9  
SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.9  
SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25)                  25   8.9  
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.9  
SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.9  

>SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20)
          Length = 457

 Score =  101 bits (242), Expect = 1e-22
 Identities = 41/71 (57%), Positives = 58/71 (81%)
 Frame = +1

Query: 10  RAELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189
           ++E  LL KVQEYCY+NM+FM+ F K+V++ YKT +LSE+ I+ WYK  +S+KGK MFL+
Sbjct: 259 KSEKNLLIKVQEYCYDNMNFMKVFQKIVLLFYKTDILSEDSIIAWYKGENSTKGKSMFLE 318

Query: 190 QMKKFVDWLQN 222
           QMKK ++WLQ+
Sbjct: 319 QMKKMIEWLQS 329


>SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)
          Length = 770

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 16  ELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSS---SKGKVMFL 186
           ++  L  +Q +C+ N        ++ ++LY   V+ EE  +KW +D +     KGK +F 
Sbjct: 690 QVCALYALQVFCHTNNHPKGLLLRMFMLLYDLEVVDEEAFVKWKEDVNEKYPGKGKALF- 748

Query: 187 DQMKKFVDWLQ 219
            Q+  ++ WL+
Sbjct: 749 -QVNTWLTWLE 758


>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
          Length = 406

 Score = 30.3 bits (65), Expect = 0.31
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 148 CTT*GSPPPRGRSSCTALPPAY*TR 74
           C + GS PP  + SCTA  P+Y TR
Sbjct: 373 CNSLGSTPPTQQPSCTAQGPSYETR 397


>SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 414

 Score = 28.7 bits (61), Expect = 0.95
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 145 YKDTSSSKGKVMFLDQMKKFVDWLQN 222
           YKD +  K K+  ++  K+FV++L+N
Sbjct: 364 YKDCNGQKSKIQSIEFQKQFVNYLEN 389


>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1230

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 19   LALLTKVQEYCYENMSFMRAFSKLVVMLY-KTSVLSEEVI 135
            L+ + K++  CY N +  RAF  L+V+ Y K +++S  ++
Sbjct: 951  LSKIAKLRPGCYINKNVSRAFCTLLVLCYTKITMISFSIL 990


>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
          Length = 770

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 150 FVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19
           F P + +LLR  ++ V+ ++Q  +   E H L+    D   +GE
Sbjct: 240 FFPFDPYLLRRSSKYVKPHYQEWKGVGEEHALLEDHQDDESEGE 283


>SB_9286| Best HMM Match : DUF240 (HMM E-Value=1)
          Length = 292

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 167 LEELVSLYHLRITSSERTLVLYSITTSL 84
           +E L +L H+++   + + VLY +TTSL
Sbjct: 255 IESLDALVHVQVNEIKNSPVLYKLTTSL 282


>SB_13659| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00051)
          Length = 1024

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 200  FFIWSRNMTLPLEELVSLYHLRITSSERTLVLY 102
            FF+W R    PLE++ S++      +++ + ++
Sbjct: 952  FFLWHRTRNKPLEDITSMFSTHSDWNDQVVCMF 984


>SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 200 FFIWSRNMTLPLEELVSLY 144
           FF+W R    PLE++ S++
Sbjct: 657 FFLWHRTRNKPLEDITSMF 675


>SB_15488| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00019)
          Length = 589

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 200 FFIWSRNMTLPLEELVSLY 144
           FF+W R    PLE++ S++
Sbjct: 511 FFLWHRTRNKPLEDITSMF 529


>SB_21071| Best HMM Match : efhand (HMM E-Value=0.48)
          Length = 151

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = +1

Query: 28  LTKVQEYCYENMSFMRAFS------KLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189
           L KV +   E   F++ +S      + V++ +   + + E++  W K   + KG++++ D
Sbjct: 64  LPKVPDGRVEYREFLKTYSTRDDVIRNVLVQHHVILNNNELLSLWRKHDVNGKGRIVYKD 123

Query: 190 QMKKFV 207
            ++ FV
Sbjct: 124 FLRHFV 129


>SB_58593| Best HMM Match : W2 (HMM E-Value=0.0069)
          Length = 160

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 37  VQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWY 147
           +Q++  +N          + +LY+  VL E VIL W+
Sbjct: 41  IQDFFLDNAWCRDTLQVCLHLLYEMDVLDETVILHWH 77


>SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 747

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 37  VQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWY 147
           +Q++  +N          + +LY+  VL E VIL W+
Sbjct: 680 IQDFFLDNAWCRDTLQVCLHLLYEMDVLDEAVILHWH 716


>SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25)
          Length = 941

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 138 EDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGELCPRA 4
           E   +  D  +V+ +HQ T R H+A ++V  L + + + E+C +A
Sbjct: 77  ESKSMLNDIDIVE-WHQHTRRTHKAGLVVKTLRE-TMRAEMCTQA 119


>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3003

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -2

Query: 198  LHLVKEHDLALGRTSVFVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19
            LH+ +E+ L +        +E +L+ +    V+ +  LTE  HE   L+  L  ++E G+
Sbjct: 2527 LHM-QEYSLDVTEVLDESSVEGNLVLDFMTQVKGFRALTENVHEILSLIEELSSINEDGQ 2585


>SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 245

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 200 FFIWSRNMTLPLEELVSLY 144
           FF+W R    PLE++ S++
Sbjct: 168 FFLWHRTRYKPLEDITSMF 186


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,822,874
Number of Sequences: 59808
Number of extensions: 137731
Number of successful extensions: 380
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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