BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0010 (304 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20) 101 1e-22 SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) 38 0.001 SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 30 0.31 SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.95 SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2 SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 27 2.9 SB_9286| Best HMM Match : DUF240 (HMM E-Value=1) 27 2.9 SB_13659| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00051) 27 3.9 SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1 SB_15488| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00019) 26 5.1 SB_21071| Best HMM Match : efhand (HMM E-Value=0.48) 26 6.7 SB_58593| Best HMM Match : W2 (HMM E-Value=0.0069) 25 8.9 SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9 SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25) 25 8.9 SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9 SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9 >SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20) Length = 457 Score = 101 bits (242), Expect = 1e-22 Identities = 41/71 (57%), Positives = 58/71 (81%) Frame = +1 Query: 10 RAELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189 ++E LL KVQEYCY+NM+FM+ F K+V++ YKT +LSE+ I+ WYK +S+KGK MFL+ Sbjct: 259 KSEKNLLIKVQEYCYDNMNFMKVFQKIVLLFYKTDILSEDSIIAWYKGENSTKGKSMFLE 318 Query: 190 QMKKFVDWLQN 222 QMKK ++WLQ+ Sbjct: 319 QMKKMIEWLQS 329 >SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) Length = 770 Score = 38.3 bits (85), Expect = 0.001 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Frame = +1 Query: 16 ELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSS---SKGKVMFL 186 ++ L +Q +C+ N ++ ++LY V+ EE +KW +D + KGK +F Sbjct: 690 QVCALYALQVFCHTNNHPKGLLLRMFMLLYDLEVVDEEAFVKWKEDVNEKYPGKGKALF- 748 Query: 187 DQMKKFVDWLQ 219 Q+ ++ WL+ Sbjct: 749 -QVNTWLTWLE 758 >SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) Length = 406 Score = 30.3 bits (65), Expect = 0.31 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 148 CTT*GSPPPRGRSSCTALPPAY*TR 74 C + GS PP + SCTA P+Y TR Sbjct: 373 CNSLGSTPPTQQPSCTAQGPSYETR 397 >SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 414 Score = 28.7 bits (61), Expect = 0.95 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = +1 Query: 145 YKDTSSSKGKVMFLDQMKKFVDWLQN 222 YKD + K K+ ++ K+FV++L+N Sbjct: 364 YKDCNGQKSKIQSIEFQKQFVNYLEN 389 >SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1230 Score = 27.5 bits (58), Expect = 2.2 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +1 Query: 19 LALLTKVQEYCYENMSFMRAFSKLVVMLY-KTSVLSEEVI 135 L+ + K++ CY N + RAF L+V+ Y K +++S ++ Sbjct: 951 LSKIAKLRPGCYINKNVSRAFCTLLVLCYTKITMISFSIL 990 >SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) Length = 770 Score = 27.1 bits (57), Expect = 2.9 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -2 Query: 150 FVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19 F P + +LLR ++ V+ ++Q + E H L+ D +GE Sbjct: 240 FFPFDPYLLRRSSKYVKPHYQEWKGVGEEHALLEDHQDDESEGE 283 >SB_9286| Best HMM Match : DUF240 (HMM E-Value=1) Length = 292 Score = 27.1 bits (57), Expect = 2.9 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -3 Query: 167 LEELVSLYHLRITSSERTLVLYSITTSL 84 +E L +L H+++ + + VLY +TTSL Sbjct: 255 IESLDALVHVQVNEIKNSPVLYKLTTSL 282 >SB_13659| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00051) Length = 1024 Score = 26.6 bits (56), Expect = 3.9 Identities = 8/33 (24%), Positives = 19/33 (57%) Frame = -3 Query: 200 FFIWSRNMTLPLEELVSLYHLRITSSERTLVLY 102 FF+W R PLE++ S++ +++ + ++ Sbjct: 952 FFLWHRTRNKPLEDITSMFSTHSDWNDQVVCMF 984 >SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 728 Score = 26.2 bits (55), Expect = 5.1 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -3 Query: 200 FFIWSRNMTLPLEELVSLY 144 FF+W R PLE++ S++ Sbjct: 657 FFLWHRTRNKPLEDITSMF 675 >SB_15488| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00019) Length = 589 Score = 26.2 bits (55), Expect = 5.1 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -3 Query: 200 FFIWSRNMTLPLEELVSLY 144 FF+W R PLE++ S++ Sbjct: 511 FFLWHRTRNKPLEDITSMF 529 >SB_21071| Best HMM Match : efhand (HMM E-Value=0.48) Length = 151 Score = 25.8 bits (54), Expect = 6.7 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Frame = +1 Query: 28 LTKVQEYCYENMSFMRAFS------KLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189 L KV + E F++ +S + V++ + + + E++ W K + KG++++ D Sbjct: 64 LPKVPDGRVEYREFLKTYSTRDDVIRNVLVQHHVILNNNELLSLWRKHDVNGKGRIVYKD 123 Query: 190 QMKKFV 207 ++ FV Sbjct: 124 FLRHFV 129 >SB_58593| Best HMM Match : W2 (HMM E-Value=0.0069) Length = 160 Score = 25.4 bits (53), Expect = 8.9 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +1 Query: 37 VQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWY 147 +Q++ +N + +LY+ VL E VIL W+ Sbjct: 41 IQDFFLDNAWCRDTLQVCLHLLYEMDVLDETVILHWH 77 >SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 747 Score = 25.4 bits (53), Expect = 8.9 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +1 Query: 37 VQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWY 147 +Q++ +N + +LY+ VL E VIL W+ Sbjct: 680 IQDFFLDNAWCRDTLQVCLHLLYEMDVLDEAVILHWH 716 >SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25) Length = 941 Score = 25.4 bits (53), Expect = 8.9 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = -2 Query: 138 EDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGELCPRA 4 E + D +V+ +HQ T R H+A ++V L + + + E+C +A Sbjct: 77 ESKSMLNDIDIVE-WHQHTRRTHKAGLVVKTLRE-TMRAEMCTQA 119 >SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3003 Score = 25.4 bits (53), Expect = 8.9 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = -2 Query: 198 LHLVKEHDLALGRTSVFVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19 LH+ +E+ L + +E +L+ + V+ + LTE HE L+ L ++E G+ Sbjct: 2527 LHM-QEYSLDVTEVLDESSVEGNLVLDFMTQVKGFRALTENVHEILSLIEELSSINEDGQ 2585 >SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 245 Score = 25.4 bits (53), Expect = 8.9 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -3 Query: 200 FFIWSRNMTLPLEELVSLY 144 FF+W R PLE++ S++ Sbjct: 168 FFLWHRTRYKPLEDITSMF 186 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,822,874 Number of Sequences: 59808 Number of extensions: 137731 Number of successful extensions: 380 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 347 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 380 length of database: 16,821,457 effective HSP length: 71 effective length of database: 12,575,089 effective search space used: 364677581 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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