Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0010
(304 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 34 0.023
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical pr... 27 2.0
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 27 2.0
AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical ... 27 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 2.6
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 26 4.5
Z75954-4|CAB00109.1| 273|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z69662-6|CAA93501.1| 283|Caenorhabditis elegans Hypothetical pr... 25 7.9
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 25 7.9
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 33.9 bits (74), Expect = 0.023
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 RAELALLTKVQEYCYENMSFMRAFSKLVVMLYKTS-VLSEEVILKWYKDTSSSKGKVMFL 186
R ++ LL +++ + SF LV LY+ + +L E+ I++W + + + K+ L
Sbjct: 588 RCQIQLLLAIEDKFDRDESFGVKAQALVHYLYQEADILDEDSIIEW-AGSIAEESKLKGL 646
Query: 187 DQMKKFVDWLQ 219
MKK VDWLQ
Sbjct: 647 --MKKIVDWLQ 655
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 270 TYLLIFFFSALRLLFSILEPVYKLLHLVKEHDLALGRTSVFV 145
T LL+F F L +LF++L+ + + + +H LG +++
Sbjct: 111 TVLLVFVFIKLCILFTVLQETIESI-MANDHPYLLGTNDIYL 151
>Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical
protein C25F9.5 protein.
Length = 707
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 141 LEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQ 25
L + LL+ED + +Y T++++ +HV+V D E+
Sbjct: 293 LLESLLKEDYLAINYYGNETKKSNNSHVVVITTYDRFEK 331
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 175 PCPWKN*CLCTT*GSPPP 122
PCP + C CTT PPP
Sbjct: 182 PCPQQAACPCTTCNQPPP 199
>AF040654-2|AAK21449.2| 1014|Caenorhabditis elegans Hypothetical
protein R06B10.2 protein.
Length = 1014
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 100 LYKTSVLSEEVILKWYKDTSSSKGKVMFLDQMK 198
+YKT + + + +KW K S +KG V+FL++M+
Sbjct: 99 VYKTQL--DALKIKWSKVDSFAKGIVIFLNEME 129
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 136 GSPPPRGRSSCTALPP 89
G PPPRG S C PP
Sbjct: 1572 GPPPPRGGSHCQGPPP 1587
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 124 EEVILK-WYKDTSSSKGKVMFLDQMKKFVDWLQN 222
E V+LK W+ D + +++ + F+DW+QN
Sbjct: 321 EHVLLKNWFSDADEEE-----MERAQSFIDWIQN 349
>Z75954-4|CAB00109.1| 273|Caenorhabditis elegans Hypothetical
protein F58H1.6 protein.
Length = 273
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 142 WYKDTSSSKGKVMFLDQMKKFVDWLQN 222
WY K K+ F + ++FVD+L N
Sbjct: 80 WYSSRRFEKKKIHFPSRRRRFVDYLIN 106
>Z69662-6|CAA93501.1| 283|Caenorhabditis elegans Hypothetical
protein F56D5.10 protein.
Length = 283
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 303 VACPVVSLTRCTYLLIFFFSALRLLFSILEPVYKLLHLVKEHDLALGRTS--VFVPLEDH 130
V C V++ +LLI +FS L F+ L ++ H + L + + ++VP+
Sbjct: 98 VYCTGVTILITIWLLIPYFSNCSLNFNALTSYHESACAPSRHPITLFQNNFLIYVPIVSM 157
Query: 129 LLREDARLVQHY 94
++ + Q Y
Sbjct: 158 VVNSGILIYQKY 169
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 148 KDTSSSKGKVMFLDQMKKFVDWL 216
KDT + FL KKFVDWL
Sbjct: 282 KDTFNLLRCTHFLTNCKKFVDWL 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,690,866
Number of Sequences: 27780
Number of extensions: 102715
Number of successful extensions: 313
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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