Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0009
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   1.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.9  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   5.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 191 RQ*AVTLQSWLCSTGENPHPS 129
           R+   TL++WL    +NP+P+
Sbjct: 93  RESTATLKAWLNEHKKNPYPT 113


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 437 CEERHDNWP*HR*YQRSCLN 378
           C E H +W  H      CLN
Sbjct: 312 CRENHASWVNHLSNIEDCLN 331


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 406 CHGQLSCRSSQRKLYLT 456
           CH  LSC+S+ +  Y T
Sbjct: 140 CHRVLSCKSALQMHYRT 156


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 164 WLCSTGENPHPSPCPL 117
           WL +    PHP+  P+
Sbjct: 37  WLAAASGAPHPAALPI 52


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 164 WLCSTGENPHPSPCPL 117
           WL +    PHP+  P+
Sbjct: 37  WLAAASGAPHPAALPI 52


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 231 VMNSTLKFVCYARSFSSCK 287
           ++N +  ++CYA    SCK
Sbjct: 136 LINISATYICYAFGKFSCK 154


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 231 VMNSTLKFVCYARSFSSCK 287
           ++N +  ++CYA    SCK
Sbjct: 369 LINISATYICYAFGKFSCK 387


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 231 VMNSTLKFVCYARSFSSCK 287
           ++N +  ++CYA    SCK
Sbjct: 369 LINISATYICYAFGKFSCK 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,094
Number of Sequences: 336
Number of extensions: 2030
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)