Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0006
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 355 1e-97
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 355 1e-97
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 355 1e-97
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 353 3e-97
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 351 1e-96
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 349 8e-96
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 266 6e-71
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 258 2e-68
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 87 8e-17
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 62 2e-09
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 62 2e-09
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 62 2e-09
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 62 2e-09
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 62 3e-09
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.81
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.81
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.81
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 33 1.1
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 33 1.1
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.5
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.5
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 32 2.5
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.5
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 32 2.5
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 32 2.5
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.5
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 32 2.5
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 32 2.5
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 32 2.5
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 32 2.5
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 31 4.3
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 31 4.3
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 31 4.3
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 31 4.3
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 31 4.3
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 31 4.3
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 31 4.3
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 31 4.3
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 31 4.3
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 31 4.3
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 31 4.3
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 31 4.3
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 31 4.3
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.7
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 5.7
BC012885-1|AAH12885.1| 480|Homo sapiens PLXDC2 protein protein. 31 5.7
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 5.7
AY358486-1|AAQ88850.1| 529|Homo sapiens ARFP2514 protein. 31 5.7
AL353147-3|CAH71084.1| 480|Homo sapiens plexin domain containin... 31 5.7
AL353147-2|CAH71083.1| 529|Homo sapiens plexin domain containin... 31 5.7
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 5.7
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 5.7
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 5.7
AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens ... 31 5.7
AF378757-1|AAL11994.1| 529|Homo sapiens tumor endothelial marke... 31 5.7
BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein. 30 10.0
AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcripti... 30 10.0
AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein pro... 30 10.0
AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein ZNF... 30 10.0
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 355 bits (872), Expect = 1e-97
Identities = 165/219 (75%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 353 bits (869), Expect = 3e-97
Identities = 164/219 (74%), Positives = 193/219 (88%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 351 bits (864), Expect = 1e-96
Identities = 164/219 (74%), Positives = 192/219 (87%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 219
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 349 bits (857), Expect = 8e-96
Identities = 164/219 (74%), Positives = 190/219 (86%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 619
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 620 SPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
SPFS+GLV++QV+D+G+ + PE+LD E L ++F GV
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGV 219
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 266 bits (652), Expect = 6e-71
Identities = 124/155 (80%), Positives = 139/155 (89%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 544
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 258 bits (631), Expect = 2e-68
Identities = 122/155 (78%), Positives = 138/155 (89%)
Frame = +2
Query: 80 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 259
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 260 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 439
MRKAI+ HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 440 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 544
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 86.6 bits (205), Expect = 8e-17
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +2
Query: 563 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTXFAPEILDIKPEDLRAKFQAGV 736
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+ + PE+LDI E L ++F GV
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGV 59
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 62.5 bits (145), Expect = 2e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 107 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 274
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 275 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 454
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 455 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 631
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 632 YGLVVKQVYDSGTXFAPEILDIKPE 706
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 62.5 bits (145), Expect = 2e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 107 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 274
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 275 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 454
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 455 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 631
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 632 YGLVVKQVYDSGTXFAPEILDIKPE 706
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 62.5 bits (145), Expect = 2e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 107 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 274
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 275 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 454
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 455 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 631
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 632 YGLVVKQVYDSGTXFAPEILDIKPE 706
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 62.5 bits (145), Expect = 2e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 107 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 274
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 275 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 454
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 455 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 631
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 632 YGLVVKQVYDSGTXFAPEILDIKPE 706
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 62.5 bits (145), Expect = 2e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 107 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 274
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 275 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 454
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 455 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 631
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 632 YGLVVKQVYDSGTXFAPEILDIKPE 706
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 61.7 bits (143), Expect = 3e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 107 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 274
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 275 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 454
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 455 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 631
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 632 YGLVVKQVYDSGTXFAPEILDIKPE 706
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.81
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.81
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.81
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 208 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 321
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 208 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 321
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 208 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 321
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 194 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 346
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 663 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 544
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 663 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 544
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC012885-1|AAH12885.1| 480|Homo sapiens PLXDC2 protein protein.
Length = 480
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +3
Query: 192 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 356
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 283 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 337
Query: 357 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 464
ETS R+ T T ++ +++ S FP + P
Sbjct: 338 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 373
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 663 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 544
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AY358486-1|AAQ88850.1| 529|Homo sapiens ARFP2514 protein.
Length = 529
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +3
Query: 192 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 356
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 332 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 386
Query: 357 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 464
ETS R+ T T ++ +++ S FP + P
Sbjct: 387 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 422
>AL353147-3|CAH71084.1| 480|Homo sapiens plexin domain containing 2
protein.
Length = 480
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +3
Query: 192 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 356
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 283 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 337
Query: 357 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 464
ETS R+ T T ++ +++ S FP + P
Sbjct: 338 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 373
>AL353147-2|CAH71083.1| 529|Homo sapiens plexin domain containing 2
protein.
Length = 529
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +3
Query: 192 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 356
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 332 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 386
Query: 357 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 464
ETS R+ T T ++ +++ S FP + P
Sbjct: 387 ETSSRTTTTVGATTTQFRVLTTTRRAVTSQFPTSLP 422
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 663 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 544
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 663 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 544
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 663 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 544
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AK126613-1|BAC86612.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ44650 fis, clone BRACE2039607. ).
Length = 182
Score = 30.7 bits (66), Expect = 5.7
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 282 TWTTIQPSRNCCHTSRATLAS-CSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQ 440
T T I PSR C ++ LAS C P + +R+ CW +L LVLV C+
Sbjct: 9 TGTVILPSRKCLSSTSPKLASGCCPWPSRMRACP-CWDAGIQL-LVLVSGGRCR 60
>AF378757-1|AAL11994.1| 529|Homo sapiens tumor endothelial marker
7-related precursor protein.
Length = 529
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +3
Query: 192 NRCSRSVSRYVAPVSCSW-EKTQ*CAKP---SKTTWTTIQPSRNCCHTSRATLA-SCSPA 356
NRC VS + +CSW K Q C+ + W C S+ + + P
Sbjct: 332 NRCGPCVSSQIG-FNCSWCSKLQRCSSGFDRHRQDWV----DSGCPEESKEKMCENTEPV 386
Query: 357 ETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 464
ETS R+ T T ++ +++ S FP + P
Sbjct: 387 ETSSRTTTTIGATTTQFRVLTTTRRAVTSQFPTSLP 422
>BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 393 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 289
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 266 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 300
>AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcription
factor protein.
Length = 399
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 393 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 289
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 266 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 300
>AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein
protein.
Length = 478
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 393 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 289
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 345 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 379
>AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein
ZNF140-like protein protein.
Length = 411
Score = 29.9 bits (64), Expect = 10.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 393 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 289
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 266 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,577,093
Number of Sequences: 237096
Number of extensions: 2929402
Number of successful extensions: 11000
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 10607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10999
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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