Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0003
         (342 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.19 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.19 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.1  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    20   9.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.5  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   9.5  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    20   9.5  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    20   9.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.19
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -2

Query: 200 KCREDNAFPWIIFHYFGKHSGCE-VIVSIFEHIREICDGCHCRDGDSKQTNDCLHV 36
           +C E      +I HY+    G E +++ I + + +   G        K  N+C HV
Sbjct: 121 RCTERPEDGALILHYYSDRPGLEHIVIGIVKTVAKKLHGTDIEMRILKTKNECDHV 176


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.19
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = -2

Query: 200 KCREDNAFPWIIFHYFGKHSGCE-VIVSIFEHIREICDGCHCRDGDSKQTNDCLHV 36
           +C E      +I HY+    G E +++ I + + +   G        K  N+C HV
Sbjct: 121 RCTERPEDGALILHYYSDRPGLEHIVIGIVKTVAKKLHGTDIEMRILKTKNECDHV 176


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 14  HSRDAGHKHEDNHLFVYYRHRGNGSRHKS 100
           +SR A   ++DN+   +Y H  N +RH S
Sbjct: 411 NSRCANFDNQDNN---HYNHNHNQARHSS 436


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 198 MPRGQRFSXDYFSLLR 151
           +PRG+ FS  Y  LLR
Sbjct: 91  LPRGELFSLYYPQLLR 106


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 198 MPRGQRFSXDYFSLLR 151
           +PRG+ FS  Y  LLR
Sbjct: 91  LPRGELFSLYYPQLLR 106


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 58  CLLSPSRQWQPSQIS 102
           C+L P   W   QIS
Sbjct: 39  CILKPKPLWTGKQIS 53


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 89  GCHCRDG 69
           GCHC+ G
Sbjct: 246 GCHCKPG 252


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 176 EKRCPLGIFG 205
           EKR P+G +G
Sbjct: 179 EKRAPMGFYG 188


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 176 EKRCPLGIFG 205
           EKR P+G +G
Sbjct: 179 EKRAPMGFYG 188


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 176 EKRCPLGIFG 205
           EKR P+G +G
Sbjct: 179 EKRAPMGFYG 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,402
Number of Sequences: 438
Number of extensions: 1580
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)