Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0002
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   0.99 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.0  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 18/63 (28%), Positives = 24/63 (38%)
 Frame = +2

Query: 422 SPTPQSSXNENGLSRESLDNHDVXXXXXXXXXKNKLNLITEKVESCMNLLDVPDRTLLHE 601
           SP+  S  N N   ++S   H           KN  N +   +    + LDV    LLH 
Sbjct: 250 SPS-HSVDNSNSSEKKSSIQHGDDAHKTHHLDKNPENTLGTMLSIHPSKLDVEQMNLLHS 308

Query: 602 GDL 610
            DL
Sbjct: 309 NDL 311


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 289 KCPKEKCLRELYAVYRDCDGDIPPRNRNVKL 381
           K  K  C    +A YR+ +G   P+N N  L
Sbjct: 22  KTDKILCFFASWAGYRNGEGSFKPQNINANL 52


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = -2

Query: 187 EVWDSKLIHIYLGHRCTCIYCILLSYLSQNTGSHI 83
           E W+   +HI    R TC  C  ++    +   H+
Sbjct: 216 EQWNHSKVHIREDKRLTCPKCPFITEYKHHLEYHL 250


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -2

Query: 187 EVWDSKLIHIYLGHRCTCIYCILLSYLSQNTGSHIIR 77
           E+ D  +     G      YC+ L Y+  N G H  R
Sbjct: 302 EIMDQGISFKEAGLFMIAFYCMTLLYIICNEGHHATR 338


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -2

Query: 187 EVWDSKLIHIYLGHRCTCIYCILLSYLSQNTGSHIIR 77
           E+ D  +     G      YC+ L Y+  N G H  R
Sbjct: 302 EIMDQGISFKEAGLFMIAFYCMTLLYIICNEGHHATR 338


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 323 YNSRRHFSLGHLRFLRLNFVFSPSVAVAP 237
           +NS  HF   H  F R +  F P +   P
Sbjct: 170 HNSGTHFWHSHSGFQRSDGTFGPFIVRVP 198


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 160 IYLGHRCTC 134
           I+ GH+CTC
Sbjct: 356 IHAGHKCTC 364


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 292 CPKEKCLRELYAVYRDCDGDIPPRNRNVKLSHLLSEQRSVLTV 420
           C K++ L    A+    D    P     KL HLL E R + ++
Sbjct: 244 CNKKQHLESPSALQAKVDPLKIPEAEKRKLIHLLQEYRCIFSL 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,105
Number of Sequences: 336
Number of extensions: 2775
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)