Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0002
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035763-1|AAH35763.2|  725|Homo sapiens exocyst complex compone...    77   8e-14
AL117352-4|CAI23095.1|  721|Homo sapiens exocyst complex compone...    77   8e-14
BC028352-1|AAH28352.1|  691|Homo sapiens TBC1 domain family, mem...    30   6.5  
AK022147-1|BAB13971.1|  674|Homo sapiens protein ( Homo sapiens ...    30   6.5  

>BC035763-1|AAH35763.2|  725|Homo sapiens exocyst complex component
           8 protein.
          Length = 725

 Score = 76.6 bits (180), Expect = 8e-14
 Identities = 36/63 (57%), Positives = 47/63 (74%)
 Frame = +2

Query: 185 FVPERYVKDLARSCVGGEELQQQKEKIQNLAEETASALKKNVYENYMQFIETATEISHLE 364
           F    YVK L++   G  +LQ+ +++IQ LAEETA  LK+NVY+NY QFIETA EIS+LE
Sbjct: 22  FEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQNLKRNVYQNYRQFIETAREISYLE 81

Query: 365 TEM 373
           +EM
Sbjct: 82  SEM 84


>AL117352-4|CAI23095.1|  721|Homo sapiens exocyst complex component
           8 protein.
          Length = 721

 Score = 76.6 bits (180), Expect = 8e-14
 Identities = 36/63 (57%), Positives = 47/63 (74%)
 Frame = +2

Query: 185 FVPERYVKDLARSCVGGEELQQQKEKIQNLAEETASALKKNVYENYMQFIETATEISHLE 364
           F    YVK L++   G  +LQ+ +++IQ LAEETA  LK+NVY+NY QFIETA EIS+LE
Sbjct: 18  FEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQNLKRNVYQNYRQFIETAREISYLE 77

Query: 365 TEM 373
           +EM
Sbjct: 78  SEM 80


>BC028352-1|AAH28352.1|  691|Homo sapiens TBC1 domain family, member
           15 protein.
          Length = 691

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 488 RRDYQETRVINRSRXPRIEAWESTVSTERCSLNKCDSLTFLFRGGIS 348
           R D  E  V+ R     +E W   + +E   LN  +    +FRGG+S
Sbjct: 302 RIDLGERPVVQRREPVSLEEWTKNIDSEGRILNVDNMKQMIFRGGLS 348


>AK022147-1|BAB13971.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12085 fis, clone HEMBB1002510, weakly similar to
           GYP7 PROTEIN. ).
          Length = 674

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 488 RRDYQETRVINRSRXPRIEAWESTVSTERCSLNKCDSLTFLFRGGIS 348
           R D  E  V+ R     +E W   + +E   LN  +    +FRGG+S
Sbjct: 285 RIDLGERPVVQRREPVSLEEWTKNIDSEGRILNVDNMKQMIFRGGLS 331


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,688,781
Number of Sequences: 237096
Number of extensions: 1464557
Number of successful extensions: 3703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3703
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)