Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0002
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-8|CAD91705.1| 339|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical... 31 0.75
AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical... 31 0.75
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 28 7.0
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 7.0
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 28 7.0
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AL132877-8|CAD91705.1| 339|Caenorhabditis elegans Hypothetical
protein Y105E8B.2b protein.
Length = 339
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Frame = +2
Query: 170 FAVPDFVPERYVKDLARSCVGGEE---LQQQKEKIQNLAEETASALKKNVYENYMQFIET 340
F F P Y++D + G+E L+ + ++ L + LK NV+ NY QFI+
Sbjct: 9 FQTDAFSPSDYIRDRLKGVKIGDETRKLRHLRSEMGALNHASQETLKNNVFRNYQQFIDA 68
Query: 341 ATEISHLETEMSSYRIC*ANSVLC*LCSPTPQSSXNENGLSRESLDNHDVXXXXXXXXXK 520
+ EISHLE E+ Y++ +S++ ++ G + S+ H V
Sbjct: 69 SKEISHLEREI--YQL--THSLI--EQKQVIENLIMMTGDDKSSI--HTVSSHSTTTSTT 120
Query: 521 NKLNLITEKVE---SCMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFN 670
N + ++ +K+E +N + ++ +L+ G++ + D E +Q+ + L +
Sbjct: 121 NPIQILMQKMEGIGGILNNMSTSEKVILY-GEMEQFDVETKKPVQKCMLILLS 172
>AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical
protein Y105E8B.2a protein.
Length = 686
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Frame = +2
Query: 170 FAVPDFVPERYVKDLARSCVGGEE---LQQQKEKIQNLAEETASALKKNVYENYMQFIET 340
F F P Y++D + G+E L+ + ++ L + LK NV+ NY QFI+
Sbjct: 9 FQTDAFSPSDYIRDRLKGVKIGDETRKLRHLRSEMGALNHASQETLKNNVFRNYQQFIDA 68
Query: 341 ATEISHLETEMSSYRIC*ANSVLC*LCSPTPQSSXNENGLSRESLDNHDVXXXXXXXXXK 520
+ EISHLE E+ Y++ +S++ ++ G + S+ H V
Sbjct: 69 SKEISHLEREI--YQL--THSLI--EQKQVIENLIMMTGDDKSSI--HTVSSHSTTTSTT 120
Query: 521 NKLNLITEKVE---SCMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFN 670
N + ++ +K+E +N + ++ +L+ G++ + D E +Q+ + L +
Sbjct: 121 NPIQILMQKMEGIGGILNNMSTSEKVILY-GEMEQFDVETKKPVQKCMLILLS 172
>AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical
protein Y95B8A.12a protein.
Length = 621
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 557 CMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFND 673
C NLL P R L+HEG L + EN M +LFND
Sbjct: 423 CENLLAHPRRKLIHEGPL---ELVENGRTVDMYAFLFND 458
>AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical
protein Y95B8A.12b protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 557 CMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFND 673
C NLL P R L+HEG L + EN M +LFND
Sbjct: 415 CENLLAHPRRKLIHEGPL---ELVENGRTVDMYAFLFND 450
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +1
Query: 265 TKFSRRNRKCPKEKCLRELYAVYRDCDGDIPPRNRNVKLSHLLSEQRSVLTVLSHASIL 441
T F R KC E + + + V + G + ++N++ HLL + V+ +L+ A ++
Sbjct: 985 TDFDERILKCLLELSVNDYFTVQKRASGYLKTISQNIRCRHLLIPR--VVEILTDAKLV 1041
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -1
Query: 500 SQPRRRDYQETRVINRSRXPRIEAWESTVSTERCSLNKCDSLTFLFRGGISPSQSR 333
S PR+R + +R +RSR P W S R +LT+ +SPS+SR
Sbjct: 353 SPPRKRPVRRSRSRSRSRTPN-RNWTRARSRTRSQAKSSSTLTW----PLSPSRSR 403
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = -2
Query: 229 DAGSSEVFYVTFGDE-----VWDSKLIHIYLGHRCTCIYCILLSYLSQNTGSHIIRFY 71
+ G VF+ F ++ VW L+ + L + C + ++ YL++NT + II +
Sbjct: 85 NTGKKPVFFSNFSNKSIFFAVWGVGLLFVTLINMCAVVGIGVMRYLTKNTYNQIITLF 142
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 155 IDMDKFAV-PDFVPERYVKDLARSCVGGEELQQQKEKIQNLAEETASALKKNVYENYMQF 331
+++ KF + + E L SC G E+ ++KE I + E T S + ++ +N + F
Sbjct: 705 VELPKFEENEENIQESCDSGLPDSCEGMEDELEEKENIVKMEEMTKSVTEMSLTDNTISF 764
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,026,637
Number of Sequences: 27780
Number of extensions: 260343
Number of successful extensions: 773
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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