BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0002 (674 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132877-8|CAD91705.1| 339|Caenorhabditis elegans Hypothetical ... 50 2e-06 AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical ... 50 2e-06 AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical... 31 0.75 AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical... 31 0.75 Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 28 7.0 U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 28 7.0 AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 28 7.0 U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 27 9.2 >AL132877-8|CAD91705.1| 339|Caenorhabditis elegans Hypothetical protein Y105E8B.2b protein. Length = 339 Score = 50.0 bits (114), Expect = 2e-06 Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 6/173 (3%) Frame = +2 Query: 170 FAVPDFVPERYVKDLARSCVGGEE---LQQQKEKIQNLAEETASALKKNVYENYMQFIET 340 F F P Y++D + G+E L+ + ++ L + LK NV+ NY QFI+ Sbjct: 9 FQTDAFSPSDYIRDRLKGVKIGDETRKLRHLRSEMGALNHASQETLKNNVFRNYQQFIDA 68 Query: 341 ATEISHLETEMSSYRIC*ANSVLC*LCSPTPQSSXNENGLSRESLDNHDVXXXXXXXXXK 520 + EISHLE E+ Y++ +S++ ++ G + S+ H V Sbjct: 69 SKEISHLEREI--YQL--THSLI--EQKQVIENLIMMTGDDKSSI--HTVSSHSTTTSTT 120 Query: 521 NKLNLITEKVE---SCMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFN 670 N + ++ +K+E +N + ++ +L+ G++ + D E +Q+ + L + Sbjct: 121 NPIQILMQKMEGIGGILNNMSTSEKVILY-GEMEQFDVETKKPVQKCMLILLS 172 >AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical protein Y105E8B.2a protein. Length = 686 Score = 50.0 bits (114), Expect = 2e-06 Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 6/173 (3%) Frame = +2 Query: 170 FAVPDFVPERYVKDLARSCVGGEE---LQQQKEKIQNLAEETASALKKNVYENYMQFIET 340 F F P Y++D + G+E L+ + ++ L + LK NV+ NY QFI+ Sbjct: 9 FQTDAFSPSDYIRDRLKGVKIGDETRKLRHLRSEMGALNHASQETLKNNVFRNYQQFIDA 68 Query: 341 ATEISHLETEMSSYRIC*ANSVLC*LCSPTPQSSXNENGLSRESLDNHDVXXXXXXXXXK 520 + EISHLE E+ Y++ +S++ ++ G + S+ H V Sbjct: 69 SKEISHLEREI--YQL--THSLI--EQKQVIENLIMMTGDDKSSI--HTVSSHSTTTSTT 120 Query: 521 NKLNLITEKVE---SCMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFN 670 N + ++ +K+E +N + ++ +L+ G++ + D E +Q+ + L + Sbjct: 121 NPIQILMQKMEGIGGILNNMSTSEKVILY-GEMEQFDVETKKPVQKCMLILLS 172 >AC024877-11|AAF60897.2| 621|Caenorhabditis elegans Hypothetical protein Y95B8A.12a protein. Length = 621 Score = 31.1 bits (67), Expect = 0.75 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +2 Query: 557 CMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFND 673 C NLL P R L+HEG L + EN M +LFND Sbjct: 423 CENLLAHPRRKLIHEGPL---ELVENGRTVDMYAFLFND 458 >AC024877-10|ABA00174.1| 613|Caenorhabditis elegans Hypothetical protein Y95B8A.12b protein. Length = 613 Score = 31.1 bits (67), Expect = 0.75 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +2 Query: 557 CMNLLDVPDRTLLHEGDLLEIDAEENTGLQRMRVYLFND 673 C NLL P R L+HEG L + EN M +LFND Sbjct: 415 CENLLAHPRRKLIHEGPL---ELVENGRTVDMYAFLFND 450 >Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein T28B8.3a protein. Length = 1838 Score = 27.9 bits (59), Expect = 7.0 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = +1 Query: 265 TKFSRRNRKCPKEKCLRELYAVYRDCDGDIPPRNRNVKLSHLLSEQRSVLTVLSHASIL 441 T F R KC E + + + V + G + ++N++ HLL + V+ +L+ A ++ Sbjct: 985 TDFDERILKCLLELSVNDYFTVQKRASGYLKTISQNIRCRHLLIPR--VVEILTDAKLV 1041 >U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical protein C37C3.1 protein. Length = 470 Score = 27.9 bits (59), Expect = 7.0 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -1 Query: 500 SQPRRRDYQETRVINRSRXPRIEAWESTVSTERCSLNKCDSLTFLFRGGISPSQSR 333 S PR+R + +R +RSR P W S R +LT+ +SPS+SR Sbjct: 353 SPPRKRPVRRSRSRSRSRTPN-RNWTRARSRTRSQAKSSSTLTW----PLSPSRSR 403 >AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical protein Y55F3BL.2 protein. Length = 462 Score = 27.9 bits (59), Expect = 7.0 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = -2 Query: 229 DAGSSEVFYVTFGDE-----VWDSKLIHIYLGHRCTCIYCILLSYLSQNTGSHIIRFY 71 + G VF+ F ++ VW L+ + L + C + ++ YL++NT + II + Sbjct: 85 NTGKKPVFFSNFSNKSIFFAVWGVGLLFVTLINMCAVVGIGVMRYLTKNTYNQIITLF 142 >U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical protein W03A3.2 protein. Length = 1540 Score = 27.5 bits (58), Expect = 9.2 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +2 Query: 155 IDMDKFAV-PDFVPERYVKDLARSCVGGEELQQQKEKIQNLAEETASALKKNVYENYMQF 331 +++ KF + + E L SC G E+ ++KE I + E T S + ++ +N + F Sbjct: 705 VELPKFEENEENIQESCDSGLPDSCEGMEDELEEKENIVKMEEMTKSVTEMSLTDNTISF 764 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,026,637 Number of Sequences: 27780 Number of extensions: 260343 Number of successful extensions: 773 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 741 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 772 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1529108810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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