Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0497
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 48 6e-06
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 48 6e-06
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 44 1e-04
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 42 5e-04
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 41 7e-04
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 41 0.001
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 40 0.001
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 40 0.001
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 40 0.001
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 38 0.006
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 38 0.008
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 38 0.008
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 38 0.008
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 36 0.020
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 36 0.026
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 35 0.060
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 34 0.079
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 32 0.32
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 32 0.32
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 31 0.97
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 30 1.7
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 2.2
At4g09780.1 68417.m01607 meprin and TRAF homology domain-contain... 28 5.2
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +2
Query: 173 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 340
L S G+ D+ + L Q+HK++LS+ S F +MF M+ + ++L DVS A
Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403
Query: 341 LRDLLQFMYQGEVNVK 388
+ ++ FMY GE+N++
Sbjct: 404 FKAMMNFMYSGELNME 419
Score = 35.9 bits (79), Expect = 0.026
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +2
Query: 161 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 334
G L L D V L E + + AHK++L F + + ++ L+ VS+
Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254
Query: 335 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEE 466
L LLQ++Y G + + ELA + + +V L Q EE
Sbjct: 255 PILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLV-RQCEE 297
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +2
Query: 173 LLSRGDLVDVTLAAEGRLL--QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSA 340
L S G+ D+ + L Q+HK++LS+ S F +MF M+ + ++L DVS A
Sbjct: 344 LYSTGEYSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEA 403
Query: 341 LRDLLQFMYQGEVNVK 388
+ ++ FMY GE+N++
Sbjct: 404 FKAMMNFMYSGELNME 419
Score = 35.9 bits (79), Expect = 0.026
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +2
Query: 161 GFHGLLSRGDLVD-VTLAAEGRL-LQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSH 334
G L L D V L E + + AHK++L F + + ++ L+ VS+
Sbjct: 200 GLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGN-----FPLRSSDGDVIQLRGVSY 254
Query: 335 SALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEE 466
L LLQ++Y G + + ELA + + +V L Q EE
Sbjct: 255 PILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLV-RQCEE 297
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 197 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKD-VSHSALRDLLQFMYQ 370
DV +GR ++AH+++LS SP+F++ F+ + + F K+ +S+ AL L+ F Y
Sbjct: 174 DVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYS 233
Query: 371 GEVNVKQEELASFISTAEQLQVKGL 445
+ + +++ + + + + L
Sbjct: 234 DRLEISVDDMEDLVRICKVCKCESL 258
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +2
Query: 176 LSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRD 349
++ L DVT EGR AH++ L S F+ MF + + + ++
Sbjct: 535 VNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFEL 594
Query: 350 LLQFMYQGEVNVKQEELASFISTAEQLQVKGL 445
+++F+Y G V++ E + A+Q ++GL
Sbjct: 595 MMRFIYTGSVDITNEISKDLLRAADQYLLEGL 626
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 146 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLK 322
+ + + F LL DVT G QAHKLVL+ S +F+ MF + + V +
Sbjct: 189 SELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVIS 248
Query: 323 DVSHSALRDLLQFMYQGEVNVKQEELAS 406
D+ + LL FMY+ + E L +
Sbjct: 249 DLEPKVFKALLHFMYKDSLPGDVEPLTA 276
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 146 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 322
+ + + F LL + D+T G AHKLVL+ SP+F+ + F + V +
Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTIN 241
Query: 323 DVSHSALRDLLQFMYQ 370
D+ + LLQFMY+
Sbjct: 242 DLEPKVFKALLQFMYK 257
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 227 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 400
+ AHK VL SP F+ M + M + + + DVS+ ALR + ++Y E + ++
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 401 ASFISTAEQLQVKGL 445
+ +E+ QVK L
Sbjct: 140 CDLLVMSEKYQVKHL 154
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 164 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHS 337
F LL G DVT +G AHKLVL+ S F+ ++F + + ++DV
Sbjct: 192 FGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAP 251
Query: 338 ALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 445
+ LL F+Y E+ Q+ + + + A L + L
Sbjct: 252 IFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHL 287
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 149 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKD 325
++S F LL G DVT + EGRL+ AH+ +L+ S +F++ F + P+ +
Sbjct: 10 SLSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPVTGIDP 69
Query: 326 VSHSAL 343
H ++
Sbjct: 70 TQHGSV 75
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 197 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQ 370
DVT +G+ AHK+ L S F+ MF V + ++ +++F+Y
Sbjct: 541 DVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYS 600
Query: 371 GEVNVKQEELASFISTAEQLQVKGL 445
G +N+ + + A+Q ++GL
Sbjct: 601 GRINIAKHLAKDLLVAADQYLLEGL 625
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Frame = +2
Query: 149 NMSAGFHGLLSRGDLV-DVTLAAEGRLLQAHKLVLSVCSPYFQEMF-KMNPTQ---HP-- 307
+MS + LL G DVT + EGRL+ AH+ +L+ S +F++ F + +P+Q P
Sbjct: 11 SMSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPSQPGAEPAN 70
Query: 308 -------------IVFLKDVSHSALRDLLQFMYQGEVNV 385
++ + V + LLQF+Y G+V++
Sbjct: 71 QTGSGARAAAVGGVIPVNSVGYEVFLLLLQFLYSGQVSI 109
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 227 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 397
+ HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 398 LASFISTAEQLQVKGL 445
S A++ + L
Sbjct: 97 YRSLYLAADKYDISYL 112
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 227 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 397
+ HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G + +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 398 LASFISTAEQLQVKGL 445
S A++ + L
Sbjct: 97 YRSLYLAADKYDISYL 112
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 146 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLK 322
+++ + F LL D D+T G +AH+LVL+ SP F+ E + + + +
Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259
Query: 323 DVSHSALRDLLQFMYQ 370
D+ + LL ++Y+
Sbjct: 260 DMEPKVFKALLHYIYK 275
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 35.9 bits (79), Expect = 0.026
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Frame = +2
Query: 149 NMSAGFHGLLSRGDLVDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQH 304
+ S G +L+ VDV L A EG + AHKL+L+ S F+ MF+++ T+H
Sbjct: 9 HFSGGLAKVLAEKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKH 68
Query: 305 -PIVFLKDVSHSALRDLLQFMYQG----EVNVKQEELASFIS 415
+ L ++ H L ++F+ NVKQ + +++
Sbjct: 69 VETITLSEMKHEELEAFVEFICSDGSMLSANVKQHARSLYLA 110
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 34.7 bits (76), Expect = 0.060
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +2
Query: 161 GFHGLLSRGDLVDVTLAA-----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIV 313
GF +L VDV L A EG AHKLVLS S F++M + + Q +
Sbjct: 13 GFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETI 72
Query: 314 FLKDVSHSALRDLLQFMY 367
L ++ H L ++F+Y
Sbjct: 73 TLCEMKHEELEAFIEFIY 90
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 34.3 bits (75), Expect = 0.079
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 146 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFL 319
+NM G LL D+ +AHKL+L+ SP F+ F + + +
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVI 237
Query: 320 KDVSHSALRDLLQFMY 367
D+ S + +L F+Y
Sbjct: 238 DDIEPSIFKAMLSFIY 253
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Frame = +2
Query: 152 MSAGFHGLLSRGDL--VDVTLAAEGRLLQAHKLVLSVCSPYFQEMF----KMNPTQHPIV 313
+S+ LLS D D + +G + H+ +L+ S +FQ++F K++ T+ P
Sbjct: 44 LSSNLEQLLSNSDCDYSDAEIIVDGVPVGVHRCILAARSKFFQDLFKKEKKISKTEKPKY 103
Query: 314 FLKD------VSHSALRDLLQFMYQGEV 379
L++ V+H A L ++Y G +
Sbjct: 104 QLREMLPYGAVAHEAFLYFLSYIYTGRL 131
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 146 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYF 271
+N+ LL G DV +G AHKLVL+ SP F
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVF 228
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 164 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQ 274
F LL G DVT +G AHKLVL+ S F+
Sbjct: 192 FGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFR 228
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 173 LLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALR 346
+L+ D+T+ A + AH+ VL+ SP F+ MF + + + + + D+ A +
Sbjct: 157 MLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLDACQ 216
Query: 347 DLLQFMY 367
L ++Y
Sbjct: 217 AFLSYIY 223
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 194 VDVTLAA----EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRD 349
VDV L A + + AHK +LS S F+EMF+ + ++ + L ++ H L
Sbjct: 23 VDVRLMARDSEKDAAISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEA 82
Query: 350 LLQFMY 367
+ F Y
Sbjct: 83 FVDFTY 88
>At4g09780.1 68417.m01607 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein low similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 443
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 179 SRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQH 304
S+G LV+ T+ E LL + + +C + F +NP QH
Sbjct: 351 SKGYLVEDTIVLETTLLCVTETKVKLCDMCKYKFFLLNPRQH 392
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,900,784
Number of Sequences: 28952
Number of extensions: 259886
Number of successful extensions: 643
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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