Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0496
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    26   0.28 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   1.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.0  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 718 HPKRIIPRLCSHTLSYSFV 662
           HPK I P +C+H ++Y+F+
Sbjct: 44  HPKNIDPNICTH-INYAFL 61


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 231 WFLGLRAAFTICTSLQSLFAGLAGY*YMYRF 139
           W L L  A  I +SL SL+  +AGY +   F
Sbjct: 226 WTLILILAKCITSSLSSLYTCIAGYEFNANF 256


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +2

Query: 431 HYAVAILEDKELHCTPLQGIIQMRPSYTYH 520
           H  V I EDK L C     I + +    YH
Sbjct: 220 HSKVHIREDKRLTCPKCPFITEYKHHLEYH 249


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 715 PKRIIPRLCSHTL 677
           P+ IIP LC+H +
Sbjct: 108 PEHIIPDLCTHII 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,155
Number of Sequences: 336
Number of extensions: 3124
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)