Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0496
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000285-1|AAH00285.1| 666|Homo sapiens POLR3E protein protein. 174 3e-43
AY092085-1|AAM18215.1| 708|Homo sapiens RNA polymerase III 80 k... 174 3e-43
AK001371-1|BAA91655.1| 708|Homo sapiens protein ( Homo sapiens ... 174 3e-43
AB040885-1|BAA95976.1| 694|Homo sapiens KIAA1452 protein protein. 174 3e-43
AK023160-1|BAB14437.1| 666|Homo sapiens protein ( Homo sapiens ... 173 7e-43
AK222789-1|BAD96509.1| 708|Homo sapiens polymerase (RNA) III (D... 172 1e-42
AK023231-1|BAB14481.1| 672|Homo sapiens protein ( Homo sapiens ... 125 2e-28
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 35 0.35
BC073938-1|AAH73938.1| 366|Homo sapiens RBBP6 protein protein. 33 0.81
AL359564-1|CAB94869.1| 529|Homo sapiens hypothetical protein pr... 33 0.81
AK026954-1|BAB15600.1| 628|Homo sapiens protein ( Homo sapiens ... 33 0.81
AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation potential... 33 0.81
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 33 0.81
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 33 0.81
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 33 1.1
>BC000285-1|AAH00285.1| 666|Homo sapiens POLR3E protein protein.
Length = 666
Score = 174 bits (423), Expect = 3e-43
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Frame = +2
Query: 80 DDDDPVVQEIPVYLSRTLAKNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLD 259
++DDPVVQEI VYL+++LA+ LY++QYP RPA+ + D+ ++A +KPK Q V LE+ +D
Sbjct: 4 EEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAID 63
Query: 260 TNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYA 439
T + +C S EQIA+N DG D++ + +++MDK + SS+ T +T YA
Sbjct: 64 TLNPNYCRSKGEQIALNVDG--------ACADETSTYSSKLMDKQTFCSSQTTSNTSRYA 115
Query: 440 VAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQEK---SKADDXXXXXXXXXXQQVTV 610
A+ ELH TPL GI+Q+RPS++Y DK D + +E+ ++A D +Q+TV
Sbjct: 116 AALYRQGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITV 175
Query: 611 KFARQETDVAKKAREKSYETITQRVTAEPW 700
+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 176 RFSRPESEQARQRRVQSYEFLQKKHAEEPW 205
>AY092085-1|AAM18215.1| 708|Homo sapiens RNA polymerase III 80 kDa
subunit RPC5 protein.
Length = 708
Score = 174 bits (423), Expect = 3e-43
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Frame = +2
Query: 80 DDDDPVVQEIPVYLSRTLAKNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLD 259
++DDPVVQEI VYL+++LA+ LY++QYP RPA+ + D+ ++A +KPK Q V LE+ +D
Sbjct: 4 EEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAID 63
Query: 260 TNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYA 439
T + +C S EQIA+N DG D++ + +++MDK + SS+ T +T YA
Sbjct: 64 TLNPNYCRSKGEQIALNVDG--------ACADETSTYSSKLMDKQTFCSSQTTSNTSRYA 115
Query: 440 VAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQEK---SKADDXXXXXXXXXXQQVTV 610
A+ ELH TPL GI+Q+RPS++Y DK D + +E+ ++A D +Q+TV
Sbjct: 116 AALYRQGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITV 175
Query: 611 KFARQETDVAKKAREKSYETITQRVTAEPW 700
+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 176 RFSRPESEQARQRRVQSYEFLQKKHAEEPW 205
>AK001371-1|BAA91655.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ10509 fis, clone NT2RP2000617. ).
Length = 708
Score = 174 bits (423), Expect = 3e-43
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Frame = +2
Query: 80 DDDDPVVQEIPVYLSRTLAKNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLD 259
++DDPVVQEI VYL+++LA+ LY++QYP RPA+ + D+ ++A +KPK Q V LE+ +D
Sbjct: 4 EEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAID 63
Query: 260 TNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYA 439
T + +C S EQIA+N DG D++ + +++MDK + SS+ T +T YA
Sbjct: 64 TLNPNYCRSKGEQIALNVDG--------ACADETSTYSSKLMDKQTFCSSQTTSNTSRYA 115
Query: 440 VAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQEK---SKADDXXXXXXXXXXQQVTV 610
A+ ELH TPL GI+Q+RPS++Y DK D + +E+ ++A D +Q+TV
Sbjct: 116 AALYRQGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITV 175
Query: 611 KFARQETDVAKKAREKSYETITQRVTAEPW 700
+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 176 RFSRPESEQARQRRVQSYEFLQKKHAEEPW 205
>AB040885-1|BAA95976.1| 694|Homo sapiens KIAA1452 protein protein.
Length = 694
Score = 174 bits (423), Expect = 3e-43
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Frame = +2
Query: 80 DDDDPVVQEIPVYLSRTLAKNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLD 259
++DDPVVQEI VYL+++LA+ LY++QYP RPA+ + D+ ++A +KPK Q V LE+ +D
Sbjct: 44 EEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAID 103
Query: 260 TNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYA 439
T + +C S EQIA+N DG D++ + +++MDK + SS+ T +T YA
Sbjct: 104 TLNPNYCRSKGEQIALNVDG--------ACADETSTYSSKLMDKQTFCSSQTTSNTSRYA 155
Query: 440 VAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQEK---SKADDXXXXXXXXXXQQVTV 610
A+ ELH TPL GI+Q+RPS++Y DK D + +E+ ++A D +Q+TV
Sbjct: 156 AALYRQGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITV 215
Query: 611 KFARQETDVAKKAREKSYETITQRVTAEPW 700
+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 216 RFSRPESEQARQRRVQSYEFLQKKHAEEPW 245
>AK023160-1|BAB14437.1| 666|Homo sapiens protein ( Homo sapiens
cDNA FLJ13098 fis, clone NT2RP3002244. ).
Length = 666
Score = 173 bits (420), Expect = 7e-43
Identities = 85/210 (40%), Positives = 134/210 (63%), Gaps = 3/210 (1%)
Frame = +2
Query: 80 DDDDPVVQEIPVYLSRTLAKNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLD 259
++DDPVVQEI VYL+++LA+ LY++QYP RPA+ + D+ ++A +KPK Q V LE+ +D
Sbjct: 4 EEDDPVVQEINVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAID 63
Query: 260 TNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYA 439
T + +C S EQIA+N DG D++ + +++MDK + SS+ T +T YA
Sbjct: 64 TLNPNYCRSKGEQIALNVDG--------ACADETSTYSSKLMDKQTFCSSQTTSNTSRYA 115
Query: 440 VAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQEK---SKADDXXXXXXXXXXQQVTV 610
A+ ELH TPL GI+Q+RPS++Y DK D +E+ ++A D +Q+TV
Sbjct: 116 AALYRQGELHLTPLHGILQLRPSFSYLDKADAEHREREAANEAGDSSQDEAEDDVKQITV 175
Query: 611 KFARQETDVAKKAREKSYETITQRVTAEPW 700
+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 176 RFSRPESEQARQRRVQSYEFLQKKHAEEPW 205
>AK222789-1|BAD96509.1| 708|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide E variant protein.
Length = 708
Score = 172 bits (418), Expect = 1e-42
Identities = 84/210 (40%), Positives = 134/210 (63%), Gaps = 3/210 (1%)
Frame = +2
Query: 80 DDDDPVVQEIPVYLSRTLAKNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLD 259
++DDPVVQEI VYL+++LA+ LY++QYP RPA+ + D+ ++A +KPK Q V LE+ +D
Sbjct: 4 EEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAID 63
Query: 260 TNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYA 439
T + +C S EQIA+N DG D++ + +++MDK + SS+ T +T YA
Sbjct: 64 TLNPNYCRSKGEQIALNVDG--------ACADETSTYSSKLMDKQTFCSSQTTSNTSRYA 115
Query: 440 VAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQEK---SKADDXXXXXXXXXXQQVTV 610
A+ ELH TPL GI+Q+RP ++Y DK D + +E+ ++A D +Q+TV
Sbjct: 116 AALYRQGELHLTPLHGILQLRPRFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITV 175
Query: 611 KFARQETDVAKKAREKSYETITQRVTAEPW 700
+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 176 RFSRPESEQARQRRVQSYEFLQKKHAEEPW 205
>AK023231-1|BAB14481.1| 672|Homo sapiens protein ( Homo sapiens
cDNA FLJ13169 fis, clone NT2RP3003805. ).
Length = 672
Score = 125 bits (301), Expect = 2e-28
Identities = 64/175 (36%), Positives = 105/175 (60%), Gaps = 3/175 (1%)
Frame = +2
Query: 185 WSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTDGHQESSWHVKEKDKSF 364
+ D+ ++A +KPK Q V LE+ +DT + +C S EQIA+N DG D++
Sbjct: 3 YDDIPHLSAKIKPKQQKVELEMAIDTLNPNYCRSKGEQIALNVDGACA--------DETS 54
Query: 365 YFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTPLQGIIQMRPSYTYHDKQDKRKQ 544
+ +++MDK + SS+ T +T YA A+ ELH TPL GI+Q+RPS++Y DK D + +
Sbjct: 55 TYSSKLMDKQTFCSSQTTSNTSRYAAALYRQGELHLTPLHGILQLRPSFSYLDKADAKHR 114
Query: 545 EK---SKADDXXXXXXXXXXQQVTVKFARQETDVAKKAREKSYETITQRVTAEPW 700
E+ ++A D +Q+TV+F+R E++ A++ R +SYE + ++ EPW
Sbjct: 115 EREAANEAGDSSQDEAEDDVKQITVRFSRPESEQARQRRVQSYEFLQKKHAEEPW 169
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 34.7 bits (76), Expect = 0.35
Identities = 37/174 (21%), Positives = 70/174 (40%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 746 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 803
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTPLQGIIQ 496
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 804 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP-----S 857
Query: 497 MRPSYTYHDKQDKRKQEKSKADDXXXXXXXXXXQQVTVKFARQETDVAKKAREK 658
+ PS ++ + + S A ++ K +++ KK ++K
Sbjct: 858 VSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKKKKKKKKKKKKKKKKKKK 911
>BC073938-1|AAH73938.1| 366|Homo sapiens RBBP6 protein protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.81
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 160 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 217
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 218 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 270
>AL359564-1|CAB94869.1| 529|Homo sapiens hypothetical protein
protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.81
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 323 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 380
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 381 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 433
>AK026954-1|BAB15600.1| 628|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23301 fis, clone HEP11120. ).
Length = 628
Score = 33.5 bits (73), Expect = 0.81
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 422 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 479
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 480 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 532
>AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation
potential-related protein protein.
Length = 1616
Score = 33.5 bits (73), Expect = 0.81
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 1410 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 1467
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 1468 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 1520
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 33.5 bits (73), Expect = 0.81
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 1552 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 1609
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 1610 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 1662
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 33.5 bits (73), Expect = 0.81
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 1586 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETDEAAFEPDYN-E 1643
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 1644 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 1696
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 33.1 bits (72), Expect = 1.1
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +2
Query: 137 KNLYIYQYPARPANRDWSDVQIVNAALKPKNQVVRLEVGLDTNSDKFCSSVAEQIAINTD 316
K LYI P ++ QI + +KPK Q+ L ++ + A + N +
Sbjct: 1419 KLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSH-SSRLSSDLTRETHEAAFEPDYN-E 1476
Query: 317 GHQESSWHVKEKDKSFYFKNRMMDKIVYESSRPTVDTRHYAVAILEDKELHCTP 478
ES+ VKE++ S + DKIV E ++ ++DT + + H +P
Sbjct: 1477 SDSESNVSVKEEESSGNISKDLKDKIV-EKAKESLDTAAVVQVGISRNQSHSSP 1529
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,161,165
Number of Sequences: 237096
Number of extensions: 1936550
Number of successful extensions: 4029
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4006
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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