Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0495
         (416 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    23   1.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   5.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   9.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   9.7  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 334 DGEAVEFAVVAGEKGFEAAG 393
           DG+ V    VA E GF+  G
Sbjct: 81  DGQQVSITYVADENGFQVQG 100


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 81  VIGERRWWQRW 49
           VI +R WW+R+
Sbjct: 70  VIDKRPWWERY 80


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 259 TKEDVFVHQTAIARNNPR 312
           +  DV+++Q  ++ NN R
Sbjct: 373 SNNDVYLYQNTMSNNNQR 390


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 259 TKEDVFVHQTAIARNNPR 312
           +  DV+++Q  ++ NN R
Sbjct: 411 SNNDVYLYQNTMSNNNQR 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.132    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,538
Number of Sequences: 438
Number of extensions: 1320
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)