Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0493
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_54664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_51990| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 31 1.3
SB_54814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021) 29 4.0
SB_42889| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 5.3
SB_18867| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_54277| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_36705| Best HMM Match : RRF (HMM E-Value=0.26) 29 5.3
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 28 7.0
SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_11830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_5215| Best HMM Match : DUF745 (HMM E-Value=1.6) 28 9.2
SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +2
Query: 191 SRSEKXXXXXXDNKVDQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEK 370
+ E+ + K + ++KL E + EK+ Q+AKK++ + E +K +EK
Sbjct: 276 TEEEEKQKEEAERKKQEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREK 335
Query: 371 SILFPEEKQSFQDFEKE 421
+ E+++ + EKE
Sbjct: 336 ERIQQEKEKQKERREKE 352
>SB_54664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 293 VEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKELF 427
+ K I + K K LLE +V + K IL EE+ F++ +E+F
Sbjct: 61 IPKCITESVKLKDLLEELKVAREKCHEILVKEEQDLFKERREEIF 105
>SB_51990| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1055
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -2
Query: 358 FFHFCVLK*RFLLFSPLYNFFNNIGICCRFGKN*QLFYILVNFIIISCVVRF--FTSTFV 185
FF CVL FLLF+P+ F+N C + N + ++I+ ++ F FT
Sbjct: 693 FFTICVLC--FLLFNPVSLIFSNFMDCSQLADNNARNFF--SYIVAVALLHFCNFTQLTS 748
Query: 184 WMRNCL 167
WM+ L
Sbjct: 749 WMKTSL 754
>SB_54814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 492 GKFILISTATLFILTTLWINTYPFLDE--DSAVYELIPNP-KWFLLFCAVWGLFFIGGLM 662
G F ++ST + +T +P +DE ++ + ++ N + FL FC G F I L+
Sbjct: 246 GAFAIVSTLLVLDITA---ENFPTVDEVNENGIETMLANMWREFLTFC---GTFIIVALL 299
Query: 663 SFTLYHIYPYL 695
FT + ++ Y+
Sbjct: 300 WFTHHSLFHYI 310
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 269 EPAADPNIVEKI-IQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFEKELF 427
E AAD +VEK ++ K+QK + KK KEK + E ++ ++ +F
Sbjct: 232 EEAADEILVEKTEVKEKKQQKRKFSFSNKKKNKEKEMDVSESEEKGEEMAPGMF 285
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 308 QRAKKQKPLLENTEVKK--GKEKSILFPEEKQSFQDFEKE 421
+ K Q P L E+ K G+E + L PEEKQ F D +E
Sbjct: 213 ESVKHQHPHLTFPEITKMLGQEWNSLLPEEKQKFLDEAEE 252
>SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021)
Length = 496
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 239 QNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTE 349
+ I K +V+ P DPN+ E K+QK LEN +
Sbjct: 205 EGILKKIVIIPPGLDPNVFEIGEDFDKRQKAFLENVQ 241
>SB_42889| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 336
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +3
Query: 507 ISTATLFILTTLWINTYPFLDEDSAVYELIPNPKWFLLFCAVWGLFFIGGLMSFTL 674
++ A+++ ++ + +N Y + + + EL + L VW + FIG + F L
Sbjct: 109 LALASIYTMSLISVNRYFCIVKPAKYQELFKKRRTVLYILGVWTIAFIGSIPPFFL 164
>SB_18867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 299 KIIQRAKKQKPLLENTEVKKGKEKSIL 379
K I+R K+Q LEN+ VK GK+K L
Sbjct: 5 KTIKRLKQQIASLENSNVKMGKQKKRL 31
>SB_54277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 525 FILTTLW-INTYPFLDEDSAVYELIPNPKWFL 617
F LTT + I Y +L+ED + NP+WF+
Sbjct: 43 FALTTSFEIGVYTYLNEDCTRESMYRNPQWFV 74
>SB_36705| Best HMM Match : RRF (HMM E-Value=0.26)
Length = 397
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 525 FILTTLW-INTYPFLDEDSAVYELIPNPKWFL 617
F LTT + I Y +L+ED + NP+WF+
Sbjct: 47 FALTTSFEIGVYTYLNEDCTRESMYRNPQWFV 78
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 414 KKNCFVAELHNYIKKYMYMDIPDAVVGKFILISTATLFILTTLWINTYPFLDEDSAVYEL 593
+KN + AE+ KY Y I DAV+ I S TLF I + + + A++
Sbjct: 401 RKNLYAAEMEELRSKYKYFRILDAVLA--IFGSDITLFASFGRDITVFENVKCEKAIFRS 458
Query: 594 IPNPK 608
+ K
Sbjct: 459 VKREK 463
>SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 287 WDLLQVRKELATFLYSGQLYYH 222
WD+ QVR+EL +Y L+ H
Sbjct: 202 WDIKQVREELGAQVYHNMLFIH 223
>SB_11830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 247 YILVNFIIISCVVRFFTSTFVWMR 176
Y++ F +IS FF + FVW+R
Sbjct: 39 YLIAQFFLISQSFLFFVARFVWLR 62
>SB_5215| Best HMM Match : DUF745 (HMM E-Value=1.6)
Length = 171
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -2
Query: 670 VKDIRPPMKNSPQTAQNSRNHFGFGINS*TAESSSKNGYVFIQRVVKINRVAVEININFP 491
+K I N+P Q S++ INS AE+++ + + + VK N + +E +
Sbjct: 103 IKQITGLEPNTPVITQKSKDILARLINSGAAEATTNINKLMMGQGVKANAIRIEDLVRKM 162
Query: 490 TTASGMSI 467
SG+ +
Sbjct: 163 NVGSGLRL 170
>SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 513 TATLFILTTLWINTYPFLDEDSAVYELIPNPKW 611
T LFI+ + +P +DE V+++ P P+W
Sbjct: 885 TVNLFIMPYNYPTLFPLIDELVKVHKMKPVPRW 917
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,681,171
Number of Sequences: 59808
Number of extensions: 399588
Number of successful extensions: 894
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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