Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0493
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    31   0.028
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   10.0 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   10.0 
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   10.0 

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 31.5 bits (68), Expect = 0.028
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 465 YMDIPDAVVGKFILISTATLFILTTLWINTYPFLDEDSAVYELIPNPKW 611
           Y+D   ++    +++ +A + ++ TLW+ TYP  D +         P W
Sbjct: 258 YLDSVGSIEDLQLIVYSAAVAVVRTLWLRTYPQGDSEGRPCSKAEKPAW 306


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 244 ILVNFIIISCVVRFFTSTFVWMRNCLTC 161
           +L+ F+ +S +    T   +WM+NC +C
Sbjct: 323 LLILFLCVSILGTLITPE-LWMKNCKSC 349


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 489 QLHQECPYTYIF*YNYVIQLQNNSFS 412
           Q+H++ P ++ F   Y+I+L  +S S
Sbjct: 492 QIHRQFPCSFEFDMGYLIKLAQHSHS 517


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 489 QLHQECPYTYIF*YNYVIQLQNNSFS 412
           Q+H++ P ++ F   Y+I+L  +S S
Sbjct: 492 QIHRQFPCSFEFDMGYLIKLAQHSHS 517


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 564 LDEDSAVYELIPNPKWFLLFCAVWGLFFIGGL 659
           L++  A + +IP+P    +FC ++G+    GL
Sbjct: 401 LNKFGAAFIMIPDPVVGGIFCVMFGMITAFGL 432


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,314
Number of Sequences: 2352
Number of extensions: 13693
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)