Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0492
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 311 YHHHGHAEFGRQHVQY 264
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 323 GQGAFGNMCRGGRMFAP 373
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +2

Query: 146 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 253
           K P++   + D+ + M    RQP+ +   A  + +A
Sbjct: 59  KLPVKAITLPDLSIPMQLGRRQPFSLFIPAHRKIAA 94


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 371 GRTYVHHDTCYRRHPDRTYE 312
           G T +HH   Y R   + YE
Sbjct: 151 GGTTLHHGMAYHRGHRKDYE 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,910
Number of Sequences: 438
Number of extensions: 2232
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)