Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0488
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    25   0.61 
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    25   0.61 
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   3.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +2

Query: 26  EQSIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKIL 181
           ++++  A +   E DS +F  +D +T +  AR+ +    + +KCI  + K+L
Sbjct: 99  KRTLSSATQASIEIDS-LFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVL 149


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +2

Query: 26  EQSIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKIL 181
           ++++  A +   E DS +F  +D +T +  AR+ +    + +KCI  + K+L
Sbjct: 99  KRTLSSATQASIEIDS-LFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVL 149


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 436 QHCTVCDATQSSNGGRSVLIVFTRH 362
           ++C  CD+ Q +N  R    V T+H
Sbjct: 62  KNCERCDSRQVANARRIARYVQTKH 86


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
          protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 35 CSALLIFYC 9
          C+AL+IFYC
Sbjct: 69 CTALVIFYC 77


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 35  CSALLIFYC 9
           C+AL+IFYC
Sbjct: 302 CTALVIFYC 310


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 35  CSALLIFYC 9
           C+AL+IFYC
Sbjct: 302 CTALVIFYC 310


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 107 LQEARYFNSTPVHPRKCIHILTKILYLL 190
           L+++RYF    V   KC+     +L++L
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 107 LQEARYFNSTPVHPRKCIHILTKILYLL 190
           L+++RYF    V   KC+     +L++L
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 107 LQEARYFNSTPVHPRKCIHILTKILYLL 190
           L+++RYF    V   KC+     +L++L
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 107 LQEARYFNSTPVHPRKCIHILTKILYLL 190
           L+++RYF    V   KC+     +L++L
Sbjct: 291 LEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,492
Number of Sequences: 336
Number of extensions: 3720
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)