Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0488
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68880-8|CAJ43445.1|  883|Caenorhabditis elegans Hypothetical pr...   260   5e-70
Z68880-7|CAA93095.1|  870|Caenorhabditis elegans Hypothetical pr...   259   1e-69
AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical ...    30   1.4  
AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z50739-3|CAA90603.2|  286|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF016660-2|AAB66048.2|  811|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF016660-1|AAK71368.1|  742|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z68880-8|CAJ43445.1|  883|Caenorhabditis elegans Hypothetical
           protein T14G10.5b protein.
          Length = 883

 Score =  260 bits (638), Expect = 5e-70
 Identities = 125/230 (54%), Positives = 164/230 (71%)
 Frame = +2

Query: 26  EQSIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 205
           + S MK  +  +E   NV+ +LDKT++LQEAR FN TP++ RKC  IL+K++Y++ QGE 
Sbjct: 10  QSSRMKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGES 69

Query: 206 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 385
           +   EAT+ FF  TKL+QSKDV LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D Y
Sbjct: 70  IGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLY 129

Query: 386 RPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINE 565
           R AAIRALC ITD+ MLQ IERYMKQAIVD+N                   ++VRRW NE
Sbjct: 130 RAAAIRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANE 189

Query: 566 AQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLC 715
            QEA++SD+ MV YHALA++   R NDRL+  KL+ K ++  +RSPY +C
Sbjct: 190 VQEAVSSDNHMVQYHALALLYQIRANDRLAVNKLVQKFSKNALRSPYAVC 239


>Z68880-7|CAA93095.1|  870|Caenorhabditis elegans Hypothetical
           protein T14G10.5a protein.
          Length = 870

 Score =  259 bits (635), Expect = 1e-69
 Identities = 124/226 (54%), Positives = 162/226 (71%)
 Frame = +2

Query: 38  MKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 217
           MK  +  +E   NV+ +LDKT++LQEAR FN TP++ RKC  IL+K++Y++ QGE +   
Sbjct: 1   MKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRT 60

Query: 218 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 397
           EAT+ FF  TKL+QSKDV LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AA
Sbjct: 61  EATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAA 120

Query: 398 IRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEA 577
           IRALC ITD+ MLQ IERYMKQAIVD+N                   ++VRRW NE QEA
Sbjct: 121 IRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEA 180

Query: 578 MTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLC 715
           ++SD+ MV YHALA++   R NDRL+  KL+ K ++  +RSPY +C
Sbjct: 181 VSSDNHMVQYHALALLYQIRANDRLAVNKLVQKFSKNALRSPYAVC 226


>AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical
           protein Y25C1A.5 protein.
          Length = 971

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/102 (19%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
 Frame = +2

Query: 158 IHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYL---CIKELSP---M 319
           I  L K++Y++  GE+ T+Q    + +       S +  L++++ +   C+ +      +
Sbjct: 39  IEALKKLIYMILNGEK-TSQSM--LMYVIRFCLPSNEHTLKKVLLIFWECVPKTDSNGKL 95

Query: 320 AQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 445
             ++I+V  +  KD+   ++  R + +R LC + +  +L+ +
Sbjct: 96  LHEMILVCDAYRKDLQHPNEFVRGSTLRFLCKLREPELLEPL 137


>AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical
           protein ZK105.3 protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 255 NSFVVAKNISVASCVVNSSPWFSK*SIFVKIWMHFLGCT 139
           NS+V+ KN++    VVN+ PW     +F +++  +   T
Sbjct: 486 NSYVLKKNLNTVLIVVNNYPWKYGMGLFQRLYEPYFAST 524


>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
            T21E8.1b protein.
          Length = 1204

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
 Frame = +2

Query: 20   LKEQSIMKARRDGKEEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLN 193
            L E     A     +ED+  F+N ++T +  L+  R   +  +   K + ++++ L  ++
Sbjct: 793  LAEYCYEAATETAIQEDTIAFENSNRTAIEALENVRTVRALNLED-KIMSLISEHLQKIH 851

Query: 194  QG--EELTTQEATDIFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDM 364
            +   +    Q A +    +  LF    V  +   YL + KE++PM   ++++T S+T +M
Sbjct: 852  KSYFKRAIIQGAANGLSLSCFLFVYS-VSFKFGTYLALRKEVAPMDTYLVLMTLSMTANM 910

Query: 365  TGKDDEYRP 391
             G    Y P
Sbjct: 911  AGSAAAYLP 919


>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.1a protein.
          Length = 1263

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
 Frame = +2

Query: 20   LKEQSIMKARRDGKEEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLN 193
            L E     A     +ED+  F+N ++T +  L+  R   +  +   K + ++++ L  ++
Sbjct: 852  LAEYCYEAATETAIQEDTIAFENSNRTAIEALENVRTVRALNLED-KIMSLISEHLQKIH 910

Query: 194  QG--EELTTQEATDIFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDM 364
            +   +    Q A +    +  LF    V  +   YL + KE++PM   ++++T S+T +M
Sbjct: 911  KSYFKRAIIQGAANGLSLSCFLFVYS-VSFKFGTYLALRKEVAPMDTYLVLMTLSMTANM 969

Query: 365  TGKDDEYRP 391
             G    Y P
Sbjct: 970  AGSAAAYLP 978


>Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical
           protein C31C9.2 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
 Frame = -1

Query: 699 ERTGVRASFVMSFTVDNLSLRLAPATTAKAW*ETIT*SEVMASCASFIQRRTKSGTVADR 520
           ++ G+  +     T D L + L           T   +E++A+ A  ++   ++GT  D 
Sbjct: 23  KQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITAELLAASAGKLKLVGRAGTGVDN 82

Query: 519 CKAETSAADPTAGFLSTIACFMYLS-IACSIVLSVMLHKARMAAGRYSSSLPVMSFVSEE 343
                ++A+      +  A     + + C+++LS+  H  + AA   +       F+ EE
Sbjct: 83  IDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMGEE 142

Query: 342 VTMITSCAIGLNSL 301
           V   T   +GL  +
Sbjct: 143 VYGRTLAVLGLGRI 156


>Z50739-3|CAA90603.2|  286|Caenorhabditis elegans Hypothetical
           protein F13D2.4 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +2

Query: 86  NLDKTTLLQEARYFNSTPVH 145
           +LDKTT+  EA+YF+  PV+
Sbjct: 225 DLDKTTVTVEAKYFHGKPVN 244


>AF016660-2|AAB66048.2|  811|Caenorhabditis elegans Hypothetical
           protein F53A10.2c protein.
          Length = 811

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 588 SEVMASCASF-IQRRTKSGTVADRCKAETSAADPTAGFLSTIAC 460
           +EV++SC  F I  RT+ GT+ +   A   A  P+A  ++ + C
Sbjct: 289 TEVISSCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLC 332


>AF016660-1|AAK71368.1|  742|Caenorhabditis elegans Hypothetical
           protein F53A10.2a protein.
          Length = 742

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 588 SEVMASCASF-IQRRTKSGTVADRCKAETSAADPTAGFLSTIAC 460
           +EV++SC  F I  RT+ GT+ +   A   A  P+A  ++ + C
Sbjct: 220 TEVISSCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLC 263


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
            T21E8.2 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
 Frame = +2

Query: 62   EEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLNQG--EELTTQEATD 229
            +ED+  F+N ++T +  L+  R   +  +   K + ++++ L  +++   +    Q A +
Sbjct: 866  QEDTIAFENSNRTAIEALENMRTVRALNLED-KIMSLISEHLQKIHKSYFKRAIIQGAAN 924

Query: 230  IFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDMTGKDDEYRP 391
                +  LF    V  +   YL + KE++PM   +I+ T S+T +M G    Y P
Sbjct: 925  GLSLSCYLFVYS-VSFKFGTYLALRKEVAPMDTYLILETLSMTANMAGSAAAYLP 978


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,788,696
Number of Sequences: 27780
Number of extensions: 360876
Number of successful extensions: 965
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)