Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0487
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.9  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 69   NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 191
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 290 RTEDLSERSGADRVHGAGLQVDENGAG 210
           +  DLS R+G+   H   L + ++G G
Sbjct: 196 KARDLSPRNGSPTDHSPVLNLSKSGGG 222


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 14/47 (29%), Positives = 16/47 (34%)
 Frame = +1

Query: 124 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTWSPAPWTLSAP 264
           PP P       S S        PP A+T     +S  S A   L  P
Sbjct: 12  PPAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIP 58


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -3

Query: 157 CKSESPW*APVGSMPC 110
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 512 VGVLFTDL*DEEGAHTGPGAATEG 441
           V +L T+  DEEG HT      EG
Sbjct: 32  VRLLVTEGWDEEGYHTPESLHYEG 55


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 334 PRDTTQRVLSSLTRSSM 384
           PR+ T+  LSSL + S+
Sbjct: 34  PREATKITLSSLAKGSL 50


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 413 LPTGLPTYTFPRWRHR 460
           L TGL T   P+W++R
Sbjct: 111 LGTGLLTSAGPKWQNR 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,543
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)