Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0487
(531 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 314 4e-86
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 309 8e-85
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 303 4e-83
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 191 3e-49
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 159 1e-39
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 134 6e-32
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 132 2e-31
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 3e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 131 4e-31
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 7e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 130 9e-31
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 4e-21
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 81 7e-16
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 1e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 2e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 64 5e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 44 8e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 4e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 39 0.002
SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0) 31 0.44
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 30 1.4
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.8
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_8719| Best HMM Match : SEA (HMM E-Value=4.7e-11) 29 2.4
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 29 3.1
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.1
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 29 3.1
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0) 28 5.4
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.4
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 7.2
SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09) 27 7.2
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 27 7.2
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 9.5
SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13) 27 9.5
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 314 bits (770), Expect = 4e-86
Identities = 143/170 (84%), Positives = 149/170 (87%)
Frame = +3
Query: 21 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 200
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 201 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 380
KYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 381 DVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
DVVRKE+ESCDCLQGFQ KIREEYPDRIMNT+
Sbjct: 331 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF 380
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 309 bits (759), Expect = 8e-85
Identities = 142/167 (85%), Positives = 146/167 (87%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+ESCDCLQGFQ KIREEYPDRIMNT+
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF 167
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 303 bits (745), Expect = 4e-83
Identities = 137/167 (82%), Positives = 146/167 (87%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+ESCDC+QGFQ KIREEYPDRIMNT+
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF 167
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 3e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 305
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 191 bits (465), Expect = 3e-49
Identities = 88/111 (79%), Positives = 92/111 (82%)
Frame = +3
Query: 198 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 377
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 378 LDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
LDVVRKE+ESCDC+QGFQ KIREEYPDRIMNT+
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTF 112
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 159 bits (386), Expect = 1e-39
Identities = 69/113 (61%), Positives = 85/113 (75%)
Frame = +3
Query: 192 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 371
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 372 SVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
++ DV+RKE+E+CDC+QG Q KIREEYPDRI++ +
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAF 123
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 134 bits (323), Expect = 6e-32
Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 203
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 384 VVRKESESCDCLQGF 428
+RK ++ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
Score = 134 bits (323), Expect = 6e-32
Identities = 61/137 (44%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +3
Query: 24 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 197
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 198 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 377
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 378 LDVVRKESESCDCLQGF 428
LD +RK ++ C LQGF
Sbjct: 552 LDRIRKLADQCTGLQGF 568
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 132 bits (319), Expect = 2e-31
Identities = 60/135 (44%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 203
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 384 VVRKESESCDCLQGF 428
+RK ++ C LQGF
Sbjct: 706 RIRKLADQCTGLQGF 720
Score = 131 bits (316), Expect = 4e-31
Identities = 61/138 (44%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Frame = +3
Query: 21 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEAS 194
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 195 GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 374
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 122 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 181
Query: 375 VLDVVRKESESCDCLQGF 428
VLD +RK ++ C LQGF
Sbjct: 182 VLDRIRKLADQCTGLQGF 199
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 33 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 206
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 207 VPRAILVDLEPGTMDSV 257
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 131 bits (317), Expect = 3e-31
Identities = 58/137 (42%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +3
Query: 24 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 197
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 198 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 377
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 378 LDVVRKESESCDCLQGF 428
LD +RK ++ C LQGF
Sbjct: 537 LDRIRKLADQCSGLQGF 553
Score = 112 bits (269), Expect = 2e-25
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Frame = +3
Query: 75 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 248
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 249 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 428
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 131 bits (316), Expect = 4e-31
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 33 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 206
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 207 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 386
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 387 VRKESESCDCLQGF 428
+RK ++ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 130 bits (314), Expect = 7e-31
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Frame = +3
Query: 24 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 197
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 198 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 377
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 378 LDVVRKESESCDCLQGF 428
LD +RK ++ C LQGF
Sbjct: 923 LDRIRKLADQCTGLQGF 939
Score = 127 bits (307), Expect = 5e-30
Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +3
Query: 33 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 206
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 207 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 386
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 387 VRKESESCDCLQGF 428
+RK ++ C LQGF
Sbjct: 493 LRKLADGCTGLQGF 506
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 130 bits (313), Expect = 9e-31
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 203
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 384 VVRKESESCDCLQGF 428
+RK ++ C LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 130 bits (313), Expect = 9e-31
Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 203
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 384 VVRKESESCDCLQGF 428
RK ++ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 102 bits (245), Expect = 2e-22
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 203
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 384 VVRKESESCDCLQGF 428
+RK ++ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +3
Query: 183 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 362
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 363 LVDSVLDVVRKESESCDCLQGF 428
+V+ V+D +RK ++ C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 97.9 bits (233), Expect = 4e-21
Identities = 40/89 (44%), Positives = 59/89 (66%)
Frame = +3
Query: 162 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 341
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 342 HYTEGAELVDSVLDVVRKESESCDCLQGF 428
HYT G E +D LD +RK ++ C LQGF
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 80.6 bits (190), Expect = 7e-16
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 309 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXX 488
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 489 KIREEYPDRIMNTY 530
KIREEYPDR+++++
Sbjct: 62 KIREEYPDRLVSSF 75
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 249 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 428
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +3
Query: 255 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 428
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 203
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 204 YVPRAILVDLEPGTMDSVR 260
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.1 bits (154), Expect = 2e-11
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +3
Query: 39 IVHLQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 200
IV LQ GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 201 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 371
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 372 SVLDVVRKESESCDCLQGF 428
VLD+V++E E CD L GF
Sbjct: 123 KVLDLVQREVEKCDRLDGF 141
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.5 bits (150), Expect = 5e-11
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3
Query: 255 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 428
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 255 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 395
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 255 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 395
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 18 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 185
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 186 EASGGKY 206
E + GK+
Sbjct: 250 ETASGKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 87 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 188
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 44.0 bits (99), Expect = 8e-05
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = +3
Query: 48 LQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 227
L GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 228 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 386
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 387 VRKESESCDCLQG 425
+RKE E CD G
Sbjct: 104 MRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 4e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 213 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 332
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 387 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNT 527
+RKE+E CD +QGFQ ++EEYPDRI+++
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSS 47
>SB_39714| Best HMM Match : Lipin_N (HMM E-Value=0)
Length = 1311
Score = 31.5 bits (68), Expect = 0.44
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = -2
Query: 368 NELSTLCVVSLGPVVAGAGL-SEDEVVRTEDLSERSGADRVHGAGLQVDENGAGHVLAAG 192
+E + CVV +G V G+G+ +D+ V +D S D G G+ D +G G
Sbjct: 1056 SENDSCCVVDVGGDVNGSGVDGDDDDVDGDDGSGSVDGDDGSGGGVGDDGSGVGD--DDD 1113
Query: 191 GFIVVYIDALQLQVRVPMVGTGGV---DAVLVRDDLPELSSN 75
IVV + + L V V M+ G+ D V D++ L N
Sbjct: 1114 DCIVVLV--MMLDVAVVMIKEEGIYLDDLTSVDDEIARLYLN 1153
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 274 PKGPERTESMVPGSKSTRMARGTYLP--PEA 188
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 326 VAGAGLSED-EVVRTEDLSERSGADRVHGAGLQVDENGAGHVLAAGGFIVVYIDALQLQV 150
VAG LSE ++ L+E ++ H D +G + A V+Y + +
Sbjct: 624 VAGRPLSEVLQLTGAIQLTEWGFSEACHPYTSGRDLLDSGDLAMAAAREVLYRVGKKDSI 683
Query: 149 RVPMVGTGGVDAVLVRDDLPELSSNLVTTLAG 54
+ P G GG D+++VRD E ++ L LAG
Sbjct: 684 KFPHSGPGGEDSIVVRDH--EEAAYLTNLLAG 713
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 343 CPLAQLLPAPDCPKTKLSGRKICP 272
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -3
Query: 322 PAPDCPKTKLSGRKICPKGPERTESMVPGS----KSTRMARGTYLPPEASL*YTLMRSN 158
P P P T + P GP+ PG TR+ GT PP A ++RSN
Sbjct: 102 PPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPHTRIVGGTKAPPGAWPWQAMLRSN 160
>SB_8719| Best HMM Match : SEA (HMM E-Value=4.7e-11)
Length = 905
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 371 LGPRCSPQRIRILRLPTGLPTYTFPRWRHRVRYGHPPHLKDP*RVPRQ 514
L P C PQ+++ LR P L P+ +R HP LK P R P+Q
Sbjct: 389 LKPLCHPQQLKPLRHPQQLKPLRHPQQLKPLR--HPQQLK-PLRHPQQ 433
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 371 LGPRCSPQRIRILRLPTGLPTYTFPRWRHRVRYGHPPHLKDP*RVPRQ 514
L P C PQ+++ LR P L P+ +R HP LK P R P+Q
Sbjct: 434 LKPLCHPQQLKPLRHPQQLKPLRHPQQLKPLR--HPQQLK-PLRHPQQ 478
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 200
+RE++ LQ G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 201 KYVPRAILVDLE 236
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 319 APDCPKTKLSGRKICPKGPERTESMVPGSKST 224
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 124 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSS--TWSPAPWTLSAPDL 270
P +P++ + T + S S +T PPA+ + P PF + +S P T S L
Sbjct: 793 PAIPSLMSSTLTSSISTTSTGMPPASLSTPTPFFTHPGFSTKPVTTSPTSL 843
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 355 PSV*CPLAQLLPAPD-CPKTKLSGRKICPKGPERTESMVPGSKSTRMARGTYLPPEA 188
P + P+ Q D CP+ + RK P G + + G+ S +++G +PP A
Sbjct: 440 PGMTHPMGQPTAMGDLCPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 185 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 75
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0)
Length = 575
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 165 APTASQSPHG--RHRWGRCRARQR*SPRT*LQSGYHIGRPVDERFPSFCISY 16
A AS S +G HRW R ARQR T ++G GR +D F F + +
Sbjct: 468 AQGASPSAYGASHHRWPRELARQRMGLLTSAETGSIPGRDMDGIFLFFGLEF 519
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 99 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 239
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGID---PTGAYHGDSDLQLERINVYYNEASGG 200
+RE++ LQ G N +G +W I D P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 201 KYVPRAILVDLE 236
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09)
Length = 435
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 132 HRWGRCRARQR*SPRT*LQSGYHIGRPVD 46
HRW ARQR P T ++G GR +D
Sbjct: 396 HRWPSVLARQRMRPLTSAETGSTPGRDID 424
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 124 PPVP-TMGTLTCSWSASMYTTMKPPAASTCPAP 219
PP P + G L + + ++ T+ PP+ CP P
Sbjct: 269 PPCPASSGCLVAAATGNLTVTLVPPSCPPCPPP 301
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 144 DSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSV 257
D+D ++ + VYYN +S G+ + ++ LVD P + V
Sbjct: 7 DNDYYMQCLTVYYNGSSAGEILCKS-LVDKIPDALQRV 43
>SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13)
Length = 464
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 107 RARHRPHRCLPWGL*LAVGAHQCILQ*SLRRQVRAPRHSRRLGARHH 247
+ RH PHR PW +G + + L + P HS L R H
Sbjct: 355 KCRHMPHRWPPWPTLTRMGLMAALTRMGLVAALAHP-HSHGLNGRPH 400
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 331 QLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSTR 221
Q +PA KT LS R+ K E+T S PG+++TR
Sbjct: 50 QEVPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,060,977
Number of Sequences: 59808
Number of extensions: 402897
Number of successful extensions: 1263
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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