Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0487
(531 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 302 1e-82
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 292 9e-80
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 290 5e-79
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 290 5e-79
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 283 4e-77
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 283 5e-77
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 198 2e-51
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 198 2e-51
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 137 4e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 137 4e-33
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 136 7e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 135 2e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 135 2e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 131 3e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 131 3e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 129 1e-30
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 128 2e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 128 2e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 128 2e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 128 2e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 126 7e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 110 5e-25
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 110 5e-25
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 107 5e-24
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 31 0.68
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 6.3
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 27 6.3
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 27 8.4
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 302 bits (741), Expect = 1e-82
Identities = 138/167 (82%), Positives = 146/167 (87%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+ESCDCLQGFQ KIREEYPDRIM T+
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTF 167
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 292 bits (717), Expect = 9e-80
Identities = 132/167 (79%), Positives = 143/167 (85%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+E CDCLQGFQ KIREEYPDRIM+++
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSF 167
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 290 bits (711), Expect = 5e-79
Identities = 132/167 (79%), Positives = 142/167 (85%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+ES DCLQGFQ KIREEYPDRIMNT+
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF 167
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 290 bits (711), Expect = 5e-79
Identities = 132/167 (79%), Positives = 142/167 (85%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+ES DCLQGFQ KIREEYPDRIMNT+
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTF 167
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 283 bits (695), Expect = 4e-77
Identities = 126/167 (75%), Positives = 142/167 (85%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+E CDCLQGFQ KIREEYPDRIM+++
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSF 167
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 283 bits (694), Expect = 5e-77
Identities = 126/167 (75%), Positives = 142/167 (85%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
RKE+E CDCLQGFQ KIREE+PDRIM+++
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSF 167
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 198 bits (483), Expect = 2e-51
Identities = 88/166 (53%), Positives = 118/166 (71%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNT 527
R+E+E+ D L+GFQ K+REEY D+ ++T
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLST 166
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 198 bits (483), Expect = 2e-51
Identities = 88/166 (53%), Positives = 118/166 (71%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNT 527
R+E+E+ D L+GFQ K+REEY D+ ++T
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLST 166
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 137 bits (332), Expect = 4e-33
Identities = 57/133 (42%), Positives = 85/133 (63%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 390 RKESESCDCLQGF 428
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 137 bits (332), Expect = 4e-33
Identities = 57/133 (42%), Positives = 85/133 (63%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 390 RKESESCDCLQGF 428
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 136 bits (330), Expect = 7e-33
Identities = 64/135 (47%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 203
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 384 VVRKESESCDCLQGF 428
VR+ +E C LQGF
Sbjct: 121 RVRRLTERCQSLQGF 135
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 136 bits (329), Expect = 9e-33
Identities = 60/133 (45%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Frame = +3
Query: 33 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 209
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 390 RKESESCDCLQGF 428
RK++E+C+ LQGF
Sbjct: 126 RKQTENCEGLQGF 138
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 135 bits (327), Expect = 2e-32
Identities = 57/133 (42%), Positives = 86/133 (64%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 390 RKESESCDCLQGF 428
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 135 bits (327), Expect = 2e-32
Identities = 57/133 (42%), Positives = 86/133 (64%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 390 RKESESCDCLQGF 428
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 131 bits (316), Expect = 3e-31
Identities = 54/133 (40%), Positives = 84/133 (63%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 390 RKESESCDCLQGF 428
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 131 bits (316), Expect = 3e-31
Identities = 54/133 (40%), Positives = 84/133 (63%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 390 RKESESCDCLQGF 428
R+ +++C LQGF
Sbjct: 121 RRLADNCSGLQGF 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 129 bits (311), Expect = 1e-30
Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 3/135 (2%)
Frame = +3
Query: 33 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 203
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 384 VVRKESESCDCLQGF 428
V++ +E+C+ LQGF
Sbjct: 127 RVKRLAENCNGLQGF 141
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 128 bits (310), Expect = 2e-30
Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 203
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 384 VVRKESESCDCLQGF 428
+R+ +++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 128 bits (310), Expect = 2e-30
Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Frame = +3
Query: 27 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 200
+ RE++ + GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 201 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 380
K+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 381 DVVRKESESCDCLQGF 428
D VR+ E+C LQGF
Sbjct: 125 DRVRRLVENCRGLQGF 140
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 128 bits (310), Expect = 2e-30
Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 203
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 384 VVRKESESCDCLQGF 428
+R+ +++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 128 bits (310), Expect = 2e-30
Identities = 55/135 (40%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 203
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 204 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 383
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 384 VVRKESESCDCLQGF 428
+R+ +++C LQGF
Sbjct: 121 RIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 126 bits (305), Expect = 7e-30
Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 33 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 206
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 207 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 386
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 387 VRKESESCDCLQGF 428
+R+ +++C LQGF
Sbjct: 121 IRRLADNCTGLQGF 134
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 122 bits (295), Expect = 1e-28
Identities = 53/133 (39%), Positives = 85/133 (63%)
Frame = +3
Query: 30 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 209
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 210 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 389
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 390 RKESESCDCLQGF 428
R+ + +C+ LQGF
Sbjct: 120 RRLANNCEGLQGF 132
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 110 bits (265), Expect = 5e-25
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 3/167 (1%)
Frame = +3
Query: 39 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 218
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 219 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 389
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
+E+E+ + L G ++RE +P +++ TY
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTY 171
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 110 bits (265), Expect = 5e-25
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 3/167 (1%)
Frame = +3
Query: 39 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 218
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 219 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 389
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 390 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 530
+E+E+ + L G ++RE +P +++ TY
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTY 171
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 107 bits (257), Expect = 5e-24
Identities = 49/110 (44%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = +3
Query: 108 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 278
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 279 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 428
+F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 30.7 bits (66), Expect = 0.68
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 124 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTWSPAPWTLSAP 264
P P +T + SM T+ PP S P+P S + +P P T AP
Sbjct: 360 PNPPQKSLITPTVPPSMIQTVNPPTVSALPSP-SVSPAPVPTTSCAP 405
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 127 PVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTWSPAPWTLS 258
P PT T T + A TT KP +T PAP +++ + P T++
Sbjct: 429 PKPTTTTTTTTTPAPT-TTQKPTTTTTTPAPTTTSTTSIPTTIA 471
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 96 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 233
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical
protein C05C10.1 protein.
Length = 471
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 127 PVPTMGTL-TCSWSASMYTTM--KPPAASTCPAPFS 225
P+P + T+ C W S YT KPP C P S
Sbjct: 370 PIPDINTVGCCQWPFSPYTNSASKPPMDFECSEPLS 405
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +1
Query: 127 PVPTMGTLTCSWSASMYTTM----KPPAASTCPAPFSSTWSPAP 246
P TM T+T + + T PP+ ST P+ +ST +P P
Sbjct: 269 PTSTMSTITLTSDRTSTITSTGSSNPPSTSTVPSTTTSTTTPKP 312
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 130 VPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTWSPAPWTLSAP 264
VP C S + T PP PAP + ++PAP AP
Sbjct: 31 VPCAAPAVCQASVCIPTAAAPPMMMAPPAPLPA-YAPAPLPAYAP 74
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 178 TTMKPPAASTCPAPFSSTWSPAPWT 252
TT+ PP S P P+ ST AP T
Sbjct: 914 TTVTPPITSEAPPPWISTTPTAPTT 938
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,979,989
Number of Sequences: 27780
Number of extensions: 291646
Number of successful extensions: 1040
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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