Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0485
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.20 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       26   0.36 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    26   0.36 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    26   0.36 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.82 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   4.4  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   5.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.6  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 197 LIAALFIGNAFIVLIIYKYRKRKNDDLEDEFNTIPLN 307
           L   L + N  + +++ KYR +KN   E    T+  N
Sbjct: 160 LFVLLIVSNVVLKILVEKYRHQKNFINESNVETVKFN 196


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 19  VTFWFEIRTSEFERHVSWKNRDGCQSRRERLFTGGHR--QRNKTAAPPRTQHDSRHRH 186
           +  WF+ R  + ++ +        Q+RRER     H+  Q+ K     +  H S H+H
Sbjct: 50  IKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 107


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 19  VTFWFEIRTSEFERHVSWKNRDGCQSRRERLFTGGHR--QRNKTAAPPRTQHDSRHRH 186
           +  WF+ R  + ++ +        Q+RRER     H+  Q+ K     +  H S H+H
Sbjct: 201 IKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 258


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 19  VTFWFEIRTSEFERHVSWKNRDGCQSRRERLFTGGHR--QRNKTAAPPRTQHDSRHRH 186
           +  WF+ R  + ++ +        Q+RRER     H+  Q+ K     +  H S H+H
Sbjct: 260 IKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 317


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 667 YIYR*IDFFSSTLNVYY*QPALASLRKLQFIIDFS 563
           Y++  ID FS  L +Y  + A A +   + I DFS
Sbjct: 218 YVFVVIDVFSKFLKLYPLRKATAKIAAKRLIEDFS 252


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 129 PMPSREESFPTALTTVSVFP 70
           P P R ESF   + TVS  P
Sbjct: 734 PPPPRVESFAETVRTVSKIP 753


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 137 FLCRCPP 117
           F+CRCPP
Sbjct: 166 FMCRCPP 172


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +1

Query: 106 RLFTGGHRQRNKTAAPPRTQHDSRHRHPV 192
           +++   HR + K A   +  HD ++ +P+
Sbjct: 85  KIWFQNHRYKTKRAQHEKGMHDQQNNNPL 113


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 126 MPSREESF--PTALTTVSVFPRHVSLKLRRSYFE 31
           MP+  E F  PT     S+  ++V+ K+R  Y+E
Sbjct: 326 MPNDFEEFVHPTVAKRGSITSKNVANKIRDFYYE 359


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 529 YLFNHTIY*KKPH 491
           Y  NH +Y K PH
Sbjct: 435 YKMNHPVYHKDPH 447


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,325
Number of Sequences: 336
Number of extensions: 3515
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)