Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0485
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 33 0.16
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 33 0.16
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 33 0.16
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 33 0.27
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 55 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 189
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 55 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 189
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 55 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 189
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 55 ERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDSRHRHP 189
E ++ + R G + RRER T H +RN AP + HDS H+HP
Sbjct: 264 ENGITVRGRGGVRFRRERSATPEHWRRN---APTKWVHDS-HKHP 304
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 118 GGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHH 297
G H R PPR + R+RH G H+ + HH Q+ +R+ R +H
Sbjct: 67 GQHHNRGHHHGPPRNHNQDRNRH--RNHDGNRHQNQDRSRHH--NQDRNRRQNHDRNRHQ 122
Query: 298 SIKRERAQ 321
S R R Q
Sbjct: 123 SQGRNRQQ 130
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 118 GGHRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHH 297
G H R PPR + R+RH G H+ + HH Q+ +R+ R +H
Sbjct: 911 GQHHNRGHHHGPPRNHNQDRNRH--RNHDGNRHQNQDRSRHH--NQDRNRRQNHDRNRHQ 966
Query: 298 SIKRERAQ 321
S R R Q
Sbjct: 967 SQGRNRQQ 974
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 263 KNDDLEDEFNTIPLNGNVHSAGYAV*SPAHQISLR-ESQIN 382
K+D+LEDE NTI L +HS P ++S R +SQ+N
Sbjct: 227 KHDELEDELNTIALE-ELHSTTRDTSPPRTRLSTRAQSQLN 266
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein
F54F12.1 protein.
Length = 1217
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 125 IGKETKLPPHQEPNMIVDIV--IPSLLIAALFIGNAFIVLIIYKYRKRKNDDLEDEFNTI 298
+ T +E NM++ I+ + LL+ A+ IG + + ++ +K+K D +D +
Sbjct: 723 VASSTPAATPEESNMLLYIIGAVGGLLVVAI-IG-VILFFVFFQKKKKKEDKPDDPPAPL 780
Query: 299 PLNGNVHSAGYAV*SPAHQISLRESQINDNKKKIPSLHSIK 421
P+ V A V PA ++E +++ + PSL S +
Sbjct: 781 PVLPPVVPAPAPV-VPAPAPVVKELSVDETQADHPSLQSFQ 820
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 124 HRQRNKTAAPPRTQHDSRHRHPVAADSGPVHRKRVH 231
H Q+ QH HR P + GP H++ +H
Sbjct: 411 HLQKFAKQQAESGQHIHHHRQPTPPNGGPQHQQHLH 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,107,099
Number of Sequences: 27780
Number of extensions: 342660
Number of successful extensions: 905
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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