Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0485
(723 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 34 0.083
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 34 0.083
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 32 0.44
At3g46290.1 68416.m05010 protein kinase, putative similar to rec... 29 2.4
At2g01100.3 68415.m00018 expressed protein 29 4.1
At2g01100.2 68415.m00017 expressed protein 29 4.1
At2g01100.1 68415.m00016 expressed protein 29 4.1
At3g53300.1 68416.m05877 cytochrome P450 family protein CYTOCHRO... 28 7.2
At3g45700.1 68416.m04939 proton-dependent oligopeptide transport... 28 7.2
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 34.3 bits (75), Expect = 0.083
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = +1
Query: 40 RTSEFERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDS-----RHRHPVAADS 204
R S +RH K++ S E HR R+ ++ +DS HRH + S
Sbjct: 666 RYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHS 725
Query: 205 GPVHRKRVHRTHHL*IQETEKRRFGRRIQHHSIKRERAQR 324
V + R+HH ++ EK R +HH + ++R
Sbjct: 726 KDVDYSKDKRSHHHRSRKHEKHRDSSDDEHHHHRHRSSRR 765
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 34.3 bits (75), Expect = 0.083
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = +1
Query: 40 RTSEFERHVSWKNRDGCQSRRERLFTGGHRQRNKTAAPPRTQHDS-----RHRHPVAADS 204
R S +RH K++ S E HR R+ ++ +DS HRH + S
Sbjct: 666 RYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHS 725
Query: 205 GPVHRKRVHRTHHL*IQETEKRRFGRRIQHHSIKRERAQR 324
V + R+HH ++ EK R +HH + ++R
Sbjct: 726 KDVDYSKDKRSHHHRSRKHEKHRDSSDDEHHHHRHRSSRR 765
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 127 RQRNKTAAPP-RTQHDSRHRHPVAADSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHHSI 303
R+R+ T +PP R R R P+ + R R++ +E RR+GR +HHS
Sbjct: 530 RRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYEGR-RRSYRDSRDISESRRYGRSDEHHSS 588
Query: 304 KRERAQ 321
R++
Sbjct: 589 SSRRSR 594
>At3g46290.1 68416.m05010 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 830
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 167 MIVDIVIPSLLIAALFIGNAFIVLIIYKYRKRKNDDLEDEFNTIPLNGNVHSAGYA 334
+IV I SLL A +F+G+ F+ +YK RKR D + +NG + Y+
Sbjct: 406 LIVGSAIGSLL-AVVFLGSCFV---LYKKRKRGQDGHSKTWMPFSINGTSMGSKYS 457
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 199 DSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHHSIKRERA 318
DSG ++R H+ H L +E+ RR +HH R+ A
Sbjct: 201 DSGKSMKRRQHKRHRLAESSSEEDGAMRRTRHHKHGRDSA 240
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 199 DSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHHSIKRERA 318
DSG ++R H+ H L +E+ RR +HH R+ A
Sbjct: 201 DSGKSMKRRQHKRHRLAESSSEEDGAMRRTRHHKHGRDSA 240
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 199 DSGPVHRKRVHRTHHL*IQETEKRRFGRRIQHHSIKRERA 318
DSG ++R H+ H L +E+ RR +HH R+ A
Sbjct: 201 DSGKSMKRRQHKRHRLAESSSEEDGAMRRTRHHKHGRDSA 240
>At3g53300.1 68416.m05877 cytochrome P450 family protein CYTOCHROME
P450 71B5, Arabidopsis thaliana, SWISSPROT:C7B5_ARATH
Length = 498
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 191 SLLIAALFIGNAFIVLIIYKYRKRKNDDLEDEFNTIPLNGNVHSAGYAV*SPAHQISLRE 370
S+ + LF+ F +L RK L +PL GN+H G + S H++SL
Sbjct: 2 SMFLGLLFLFPLFFILFKNLLPPRKK--LPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEH 59
Query: 371 SQI 379
+
Sbjct: 60 GPV 62
>At3g45700.1 68416.m04939 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 548
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 125 IGKETKLPPHQEPNMIVDIVIPSLLIAALFIGNAFIVLI-IYKYRKRKNDDLEDEFNTI 298
I + TK P+ + VD V L+I + F+V YKYR KNDD E + +
Sbjct: 488 IQRTTKWLPNDINHGRVDNVYLVLVIIGVSNFGYFLVCSWFYKYRNLKNDDHEQDLKDV 546
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,994,383
Number of Sequences: 28952
Number of extensions: 312145
Number of successful extensions: 826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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