Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0482
         (766 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67550.1 68414.m07696 urease, putative / urea amidohydrolase,...    28   5.9  
At5g05440.1 68418.m00586 expressed protein low similarity to cyt...    28   7.8  

>At1g67550.1 68414.m07696 urease, putative / urea amidohydrolase,
           putative similar to SP|P07374 Urease (EC 3.5.1.5) (Urea
           amidohydrolase) {Canavalia ensiformis}; contains Pfam
           profile PF01979: Amidohydrolase family
          Length = 838

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 30  CNLHWILPTLVYKRTS---TSLWGEWMGVMHGDEMEYVFGHPLNMSLQYHSRE 179
           C++H+I P LVY+  S   T++ G   G  +G         P +M L   S +
Sbjct: 404 CHVHFICPQLVYEAVSSGITTMVGGGTGPAYGTRATTCTPSPFDMKLMLQSTD 456


>At5g05440.1 68418.m00586 expressed protein low similarity to
           cytokinin-specific binding protein [Vigna radiata]
           GI:4190976
          Length = 203

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 119 VTMHHTHPFSPETCAGTLV 63
           V MHHTH   P+ C  ++V
Sbjct: 45  VAMHHTHDVGPDQCCSSVV 63


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,311,005
Number of Sequences: 28952
Number of extensions: 332514
Number of successful extensions: 904
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)