Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0478
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1324 + 32659752-32661972,32662067-32662761 34 0.086
05_03_0035 - 7592177-7592938 32 0.26
05_03_0033 - 7585267-7586028 32 0.26
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 31 0.61
04_03_0446 - 16012926-16013042,16013266-16013469 30 1.4
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 29 1.8
10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283 29 3.2
09_03_0099 + 12353777-12353877,12354022-12354220,12354720-123548... 29 3.2
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 5.6
06_02_0092 - 11624905-11625123,11625206-11625292,11625767-116258... 28 5.6
04_03_0946 + 20975955-20976095,20976189-20976330,20976449-209765... 28 5.6
04_03_0719 + 19006730-19007440 28 5.6
03_04_0201 - 18409088-18409306,18409389-18409475,18409950-184100... 28 5.6
12_02_1005 + 25235757-25235915,25236258-25236374,25236467-252365... 27 7.5
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 27 7.5
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 27 7.5
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 27 7.5
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 27 7.5
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 27 7.5
01_01_1202 - 9681836-9683146 27 7.5
10_01_0073 - 955746-955758,955811-956832 27 9.9
10_01_0072 - 918323-918335,918388-919409 27 9.9
05_06_0141 - 25964706-25965473 27 9.9
>04_04_1324 + 32659752-32661972,32662067-32662761
Length = 971
Score = 33.9 bits (74), Expect = 0.086
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 191 EHLDRETKQDPADSPVH--HHRVATQSFLEM-ERGPAAEHRPPSVAEKLMDHMADKFTDS 361
EH + AD+ VH HR + S E P+ EHR SV+ A TDS
Sbjct: 396 EHRQLSMSLNDADTEVHGGEHRRLSMSLNEAGTEQPSGEHRQLSVSSS----DAGSSTDS 451
Query: 362 ESDADTAGESP 394
SD+DT G P
Sbjct: 452 TSDSDTPGGDP 462
>05_03_0035 - 7592177-7592938
Length = 253
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 206 ETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAG 385
E +P P + S+ + + GP E +P A + T SES ++
Sbjct: 52 EKSSEPEAKPASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESKPATYSESKPESKA 111
Query: 386 ESPLHRPEPRVE 421
E P +PEP+ E
Sbjct: 112 E-PESKPEPKAE 122
>05_03_0033 - 7585267-7586028
Length = 253
Score = 32.3 bits (70), Expect = 0.26
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 206 ETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAG 385
E +P P + S+ + + GP E +P A + T SES ++
Sbjct: 52 EKSSEPEAKPASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESKPATYSESKPESKA 111
Query: 386 ESPLHRPEPRVE 421
E P +PEP+ E
Sbjct: 112 E-PESKPEPKAE 122
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 503 RARGPAPVSGRELQASVVPVSER*ASGVRPSARADGGATLLQY 375
R+R P P+ R AS+ P E A PSA ++G L+ Y
Sbjct: 754 RSRSPPPIHNRSPLASLSPKRESNAKSRSPSASSEGKKGLVSY 796
>04_03_0446 - 16012926-16013042,16013266-16013469
Length = 106
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 267 SWRWNVGPQRNIGRLPSPKSLW 332
SWRW GR PSP+ +W
Sbjct: 46 SWRWRQAEGSPAGRSPSPRQIW 67
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 352 KFVGHVVHKLFGDGRRPMFRCGPTFHLQETLSGH 251
K+ HV+ LF D CG F L+E LS H
Sbjct: 879 KYHAHVISTLFDDQSHQCNTCGLRFSLEEELSVH 912
>10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283
Length = 384
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -3
Query: 539 LWAPQVSRAQAERARGPAPVSGRELQASVVPVSER*ASGVRPSARAD--GGATLLQYRRL 366
LW+ +++ A AE P P +LQ ++ P ++ V A + GATL
Sbjct: 272 LWSRRLAHAAAEGRTSPQPPRDEQLQITLPPPPQKVTKTVLAPATGEPSRGATLSSSAAT 331
Query: 365 THCR*ICRP 339
T C + P
Sbjct: 332 TCCTFLTSP 340
>09_03_0099 +
12353777-12353877,12354022-12354220,12354720-12354845,
12354935-12355093,12356286-12356415,12356551-12356592,
12357507-12357806,12357933-12357984,12358157-12358234,
12359133-12359229
Length = 427
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 206 ETKQDP-ADSPVHHHRVATQSFLEMERGPAAEH-RPPSVAEKLMDHMADKFTDSESDADT 379
E ++D ADSP T S L+ME GP+A H + K D D F D + D
Sbjct: 267 EAEEDMFADSPKDK---TTASLLDMEPGPSAAHTSTTTTTSKEDDSDFDMFGDDDDKTDV 323
Query: 380 AGES 391
+S
Sbjct: 324 KRDS 327
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 315 SPKSLWTTWPTNLPTVSQTPILQESRPSIGPS 410
SP T+W TN ++S +PIL P PS
Sbjct: 97 SPTPTTTSWTTNSSSISASPILPPPPPPPMPS 128
>06_02_0092 -
11624905-11625123,11625206-11625292,11625767-11625889,
11625992-11626351,11626427-11626511,11626603-11626661,
11627173-11627265,11627360-11627464,11627539-11627636,
11627811-11627916,11628009-11628131,11628986-11629021,
11629113-11629310,11629415-11629612,11629917-11630056,
11630181-11630322,11630416-11630556
Length = 770
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 272 EMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAGES 391
E G ++R +V E LMD++ DS+ DA AG S
Sbjct: 238 EKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLS 277
>04_03_0946 +
20975955-20976095,20976189-20976330,20976449-20976588,
20976893-20977090,20977195-20977392,20977484-20977519,
20978374-20978496,20978589-20978694,20978869-20978966,
20979041-20979145,20979240-20979332,20979842-20979900,
20979984-20980068,20980144-20980503,20980606-20980728,
20981203-20981289,20981372-20981590
Length = 770
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 272 EMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAGES 391
E G ++R +V E LMD++ DS+ DA AG S
Sbjct: 238 EKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLS 277
>04_03_0719 + 19006730-19007440
Length = 236
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 405 GRWRGDSPAVSASDSLSVNLSAMWSISFSATEGGRCSAA 289
GR+ GD +AS SV+ AM +++ +A+ CS+A
Sbjct: 126 GRYDGDDHHDAASSVSSVDAGAMAAMAAAASSNSSCSSA 164
>03_04_0201 -
18409088-18409306,18409389-18409475,18409950-18410072,
18410175-18410534,18410610-18410694,18410780-18410838,
18411350-18411442,18411537-18411641,18411716-18411813,
18411988-18412093,18412186-18412308,18413163-18413198,
18413290-18413487,18413592-18413789,18414094-18414233,
18414356-18414497,18414591-18414731
Length = 770
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 272 EMERGPAAEHRPPSVAEKLMDHMADKFTDSESDADTAGES 391
E G ++R +V E LMD++ DS+ DA AG S
Sbjct: 238 EKNSGGNDQNRAWNVPEPLMDYLKTNLNDSQLDAVNAGLS 277
>12_02_1005 +
25235757-25235915,25236258-25236374,25236467-25236535,
25237509-25237964
Length = 266
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 245 HRVATQSFLEMERGPAAEHRPPSVAEKLMDHM---ADKFTDSESDADTAGE 388
H+VA +L E G PP+ +K MD+M A + + +D +GE
Sbjct: 12 HQVAAGGWLSPEAGDDRRAAPPAPEKKQMDNMPAVASPTMNKDEASDDSGE 62
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 336 TWPTNLPTVSQTPILQESRPSIGPSRGSNSRSLALRHRNH 455
T PTN P S++P L + RP + G+ + ++NH
Sbjct: 409 TQPTNAPPPSRSPPLLKQRPLQAKANGNYDGYVRQSNQNH 448
>06_03_1309 + 29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 263 SEWPRDDGVPVNPPGLV 213
S WP DD P+N PG +
Sbjct: 1140 SSWPEDDKEPLNAPGYI 1156
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 27.5 bits (58), Expect = 7.5
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +3
Query: 225 RIHRYTIIAWPLRVSWRWNVGPQRNIGRLPSPKSLWTTWPTNLPTVSQTPILQESRPSIG 404
R+++ I W +V R V QR+ P PK + T P N + + RP+
Sbjct: 80 RVYQEKIAKWQTQVEERLRVLGQRSGAAAPVPKKVVTNNPVNRNDRAASTSFH--RPTSQ 137
Query: 405 PSRGSNSRSLALRHR 449
PS N A H+
Sbjct: 138 PSPTFNRGGQASSHQ 152
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 182 DDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMADKFTDS 361
DD E LD + DS + + S ++ E + ++EKL D +D+ +D
Sbjct: 542 DDTEELDEDQDISDNDSEENDDELELDSDMDEENDVSESDDDEELSEKLDD--SDEGSDQ 599
Query: 362 ESDADTAGES 391
+ D+D +S
Sbjct: 600 DDDSDQDDKS 609
>01_06_1097 + 34507376-34507395,34509380-34511214,34511263-34511598,
34511800-34513691
Length = 1360
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +2
Query: 152 QTMKRDQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLM 331
+ + DQ D H+D T A+S + ++++ F M+ EH S +
Sbjct: 972 EATRSDQQMPDVDSHIDNNTSNGVAESSLISPQISSNIFSNMKYASMLEHEENSPLVDDL 1031
Query: 332 DHMADKFTDSESDADTAGESPLHRPEPRV 418
+ +F S + E ++ P R+
Sbjct: 1032 NGTGPEFGWSLGASYDDPEQTVYNPRRRI 1060
>01_01_1202 - 9681836-9683146
Length = 436
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 375 ILQESRPSIGPSRGSNSRSLAL 440
++ ESRP++GP+ GS+S + A+
Sbjct: 205 LVYESRPTVGPASGSSSYASAM 226
>10_01_0073 - 955746-955758,955811-956832
Length = 344
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 320 RRRKAADVPLRAHVPSPRNSEWPRDDGVPVNPP 222
++R+ P P+ S PR+DG P N P
Sbjct: 191 KKRQQGRQPKVPRAKKPKKSAAPREDGAPPNAP 223
>10_01_0072 - 918323-918335,918388-919409
Length = 344
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 320 RRRKAADVPLRAHVPSPRNSEWPRDDGVPVNPP 222
++R+ P P+ S PR+DG P N P
Sbjct: 191 KKRQQGRQPKVPRAKKPKKSAAPREDGAPPNAP 223
>05_06_0141 - 25964706-25965473
Length = 255
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 287 PAAEHRPPSVAEKLMDHMADKFTDSESDADTAGES 391
PAA PP + L ++++ + +D E++AD E+
Sbjct: 21 PAAVEIPPELLAALGEYLSARRSDGEAEADAEAEA 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,209,223
Number of Sequences: 37544
Number of extensions: 343855
Number of successful extensions: 1223
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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