Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0478
(550 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 26 0.94
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 25 1.6
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 25 1.6
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 25 1.6
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 3.8
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 5.0
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 6.6
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 6.6
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 8.8
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 8.8
AY176048-1|AAO19579.1| 521|Anopheles gambiae cytochrome P450 CY... 23 8.8
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 23 8.8
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 8.8
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 25.8 bits (54), Expect = 0.94
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 221 PADSPVHHHRVATQSFLEMERGPAAEHRPP 310
P P+HH A+Q F+ +H PP
Sbjct: 357 PIYQPLHHFSAASQRFMLRSCNSLGDHIPP 386
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 25.0 bits (52), Expect = 1.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 402 RWRGDSPAVSASDSLSVNLSAMWSISFSATEGG 304
+W D + + +LSV L +W F+A E G
Sbjct: 77 KWGKDIEFLLSCIALSVGLGNVWRFPFTALENG 109
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 25.0 bits (52), Expect = 1.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 402 RWRGDSPAVSASDSLSVNLSAMWSISFSATEGG 304
+W D + + +LSV L +W F+A E G
Sbjct: 77 KWGKDIEFLLSCIALSVGLGNVWRFPFTALENG 109
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 25.0 bits (52), Expect = 1.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 381 AVSASDSLSVNLSAMWSISFSATEGGRCSAAG 286
AV SLS+++++M S + + GGR S+ G
Sbjct: 988 AVVRPQSLSLSMNSMGSDNSEQSSGGRLSSGG 1019
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.8 bits (49), Expect = 3.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 283 TFHLQETLSGHAMM 242
TFHL + LSGH +
Sbjct: 928 TFHLSQVLSGHGFL 941
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 23.4 bits (48), Expect = 5.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 185 HPSSPGRASW 156
H SSPGR SW
Sbjct: 1216 HKSSPGRGSW 1225
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 6.6
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 333 TTWPTNLPTVSQ 368
T WPT+ PT SQ
Sbjct: 384 TDWPTHQPTTSQ 395
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.0 bits (47), Expect = 6.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 283 TFHLQETLSGH 251
TFHL + LSGH
Sbjct: 988 TFHLSQVLSGH 998
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 22.6 bits (46), Expect = 8.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 283 TFHLQETLSGH 251
TFHL + LSGH
Sbjct: 976 TFHLAQVLSGH 986
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 22.6 bits (46), Expect = 8.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 283 TFHLQETLSGH 251
TFHL + LSGH
Sbjct: 980 TFHLAQVLSGH 990
>AY176048-1|AAO19579.1| 521|Anopheles gambiae cytochrome P450
CYP12F4 protein.
Length = 521
Score = 22.6 bits (46), Expect = 8.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +2
Query: 260 QSFLEMERGPAAEHRPPSVAEKLM 331
++ + ME+ P+A+ S+ EKL+
Sbjct: 283 EAVIRMEKNPSADQDTLSILEKLL 306
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 22.6 bits (46), Expect = 8.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 344 DKFTDSESDADTAGESPLHRPEP 412
D ++ SESD+D+ ++P P
Sbjct: 475 DFYSSSESDSDSLSSEEFYQPIP 497
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 22.6 bits (46), Expect = 8.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 344 DKFTDSESDADTAGESPLHRPEP 412
D ++ SESD+D+ ++P P
Sbjct: 475 DFYSSSESDSDSLSSEEFYQPIP 497
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,472
Number of Sequences: 2352
Number of extensions: 10053
Number of successful extensions: 28
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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