BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0478
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein. 33 0.25
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 33 0.25
AY071175-1|AAL48797.1| 124|Drosophila melanogaster RE22927p pro... 29 4.1
BT011454-1|AAR99112.1| 558|Drosophila melanogaster RE36948p pro... 29 5.5
AF184229-1|AAD55740.1| 919|Drosophila melanogaster BcDNA.LD2797... 29 5.5
AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556... 29 5.5
AE014297-2297|AAF55382.1| 968|Drosophila melanogaster CG5208-PA... 29 5.5
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA... 29 5.5
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 28 7.2
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 28 7.2
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 28 7.2
U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger nu... 28 9.6
BT001903-1|AAN71692.1| 913|Drosophila melanogaster SD22693p pro... 28 9.6
AY070517-1|AAL47988.1| 593|Drosophila melanogaster GH21463p pro... 28 9.6
AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p pro... 28 9.6
AL031227-3|CAA20227.1| 1891|Drosophila melanogaster EG:66A1.1,FB... 28 9.6
AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB... 28 9.6
AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA... 28 9.6
AE014296-1326|AAF50515.1| 593|Drosophila melanogaster CG32369-P... 28 9.6
AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-P... 28 9.6
>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
Length = 2412
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 161 KRDQDSTDDFEHLDRE--TKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAE 322
+ D D DD +++D E T +D + Q LE ER H+PPS+A+
Sbjct: 1968 RNDDDDDDDEDYVDDEPPTDEDKFERLNRRRHEMHQRMLESERRQMERHQPPSLAK 2023
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 161 KRDQDSTDDFEHLDRE--TKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAE 322
+ D D DD +++D E T +D + Q LE ER H+PPS+A+
Sbjct: 1911 RNDDDDDDDEDYVDDEPPTDEDKFERLNRRRHEMHQRMLESERRQMERHQPPSLAK 1966
>AY071175-1|AAL48797.1| 124|Drosophila melanogaster RE22927p
protein.
Length = 124
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 220 PGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGPH 339
PGG +G SS + ++ G G+++++GT A G H
Sbjct: 82 PGGGSGIGSSMSNMQYNGSGSYSKNGTVAMHNYYVKNGHH 121
>BT011454-1|AAR99112.1| 558|Drosophila melanogaster RE36948p
protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 342 PTNLPTVSQTPILQESRPSIGPSRGSNSRSL 434
P N+P + Q P++Q+ P P G N R L
Sbjct: 338 PGNIPQLPQHPLMQQHMPHNFPLPGGNQRPL 368
>AF184229-1|AAD55740.1| 919|Drosophila melanogaster BcDNA.LD27979
protein.
Length = 919
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 342 PTNLPTVSQTPILQESRPSIGPSRGSNSRSL 434
P N+P + Q P++Q+ P P G N R L
Sbjct: 289 PGNIPQLPQHPLMQQHMPHNFPLPGGNQRPL 319
>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
protein.
Length = 1028
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 176 STDDFEHLDRET---KQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEK 325
S+ D E+L ++ ++DP PV V TQ LE+E P + H ++ K
Sbjct: 449 SSVDLENLQKDQDGKRRDPDKLPVALENVETQKELELENLPESSHNNKNLRVK 501
>AE014297-2297|AAF55382.1| 968|Drosophila melanogaster CG5208-PA
protein.
Length = 968
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 342 PTNLPTVSQTPILQESRPSIGPSRGSNSRSL 434
P N+P + Q P++Q+ P P G N R L
Sbjct: 338 PGNIPQLPQHPLMQQHMPHNFPLPGGNQRPL 368
>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
protein.
Length = 1028
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 176 STDDFEHLDRET---KQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEK 325
S+ D E+L ++ ++DP PV V TQ LE+E P + H ++ K
Sbjct: 449 SSVDLENLQKDQDGKRRDPDKLPVALENVETQKELELENLPESSHNNKNLRVK 501
>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
protein protein.
Length = 3579
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 170 QDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMD 334
QD+ D EH+ + K + +P+ + + S+L+ + PPS+ E + D
Sbjct: 3282 QDTGSDNEHVHGQAKMTISPNPLPNPDLTDTSYLQQHHNKI--NMPPSILENIRD 3334
>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
protein.
Length = 3574
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 170 QDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMD 334
QD+ D EH+ + K + +P+ + + S+L+ + PPS+ E + D
Sbjct: 3282 QDTGSDNEHVHGQAKMTISPNPLPNPDLTDTSYLQQHHNKI--NMPPSILENIRD 3334
>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
Length = 3575
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 170 QDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMD 334
QD+ D EH+ + K + +P+ + + S+L+ + PPS+ E + D
Sbjct: 3283 QDTGSDNEHVHGQAKMTISPNPLPNPDLTDTSYLQQHHNKI--NMPPSILENIRD 3335
>U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger
nuclear protein hindsightprotein.
Length = 1920
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 187 FRASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGP 336
FR +RS GF S+ GHS +LG+ + A + T+ + A P
Sbjct: 153 FRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNTTATSGIGASAVAP 202
>BT001903-1|AAN71692.1| 913|Drosophila melanogaster SD22693p
protein.
Length = 913
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 173 DSTDDFEHLDRETKQDPADSPVHHHRVATQS 265
D T D+ H D Q PA P++HH+ A QS
Sbjct: 842 DKTLDWLH-DLSHPQQPAHHPMNHHQQAPQS 871
>AY070517-1|AAL47988.1| 593|Drosophila melanogaster GH21463p
protein.
Length = 593
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 173 DSTDDFEHLDRETKQDPADSPVHHHRVATQS 265
D T D+ H D Q PA P++HH+ A QS
Sbjct: 522 DKTLDWLH-DLSHPQQPAHHPMNHHQQAPQS 551
>AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p
protein.
Length = 1893
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 187 FRASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGP 336
FR +RS GF S+ GHS +LG+ + A + T+ + A P
Sbjct: 153 FRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNTTATSGIGASAVAP 202
>AL031227-3|CAA20227.1| 1891|Drosophila melanogaster
EG:66A1.1,FBgn0003053;peb protein.
Length = 1891
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 187 FRASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGP 336
FR +RS GF S+ GHS +LG+ + A + T+ + A P
Sbjct: 153 FRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNTTATSGIGASAVAP 202
>AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB,
isoform B protein.
Length = 1894
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 187 FRASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGP 336
FR +RS GF S+ GHS +LG+ + A + T+ + A P
Sbjct: 153 FRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNTTATSGIGASAVAP 202
>AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA,
isoform A protein.
Length = 1894
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 187 FRASRS*N*TRPGGFTGTPSSRGHSEFLGDGTWARSGTSAAFRRRKAYGP 336
FR +RS GF S+ GHS +LG+ + A + T+ + A P
Sbjct: 153 FRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNTTATSGIGASAVAP 202
>AE014296-1326|AAF50515.1| 593|Drosophila melanogaster CG32369-PB,
isoform B protein.
Length = 593
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 173 DSTDDFEHLDRETKQDPADSPVHHHRVATQS 265
D T D+ H D Q PA P++HH+ A QS
Sbjct: 522 DKTLDWLH-DLSHPQQPAHHPMNHHQQAPQS 551
>AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-PA,
isoform A protein.
Length = 1066
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 173 DSTDDFEHLDRETKQDPADSPVHHHRVATQS 265
D T D+ H D Q PA P++HH+ A QS
Sbjct: 995 DKTLDWLH-DLSHPQQPAHHPMNHHQQAPQS 1024
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,565,227
Number of Sequences: 53049
Number of extensions: 509090
Number of successful extensions: 2217
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -