Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0474
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -2

Query: 597 CVLCQSLT*CCWSGRSGQTTYCASVTSAAPP 505
           C  C S T CC++   G   Y        PP
Sbjct: 437 CKTCNSKTKCCFAQDDGLCPYTLKHKIRVPP 467


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 644 SYSVCVCMSRLCVCGCVCYVSPSLDVA 564
           S S+  C S+ C  G  C +SP+  +A
Sbjct: 76  SRSIDPCASKYCGIGKECELSPNSTIA 102


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 217 FLSDRSQLRLRARGQRSTWREFWNRF 140
           F+ D  +  L  +G R+T+  FWN F
Sbjct: 556 FIFDAEKTGL-GKGPRTTYCAFWNEF 580


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 673 SRRCLCMYVY 644
           +RRCLC Y+Y
Sbjct: 323 ARRCLCEYLY 332


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 32  YVIEASDVDDMKSWLATIKYCM 97
           YV E S  DD+  W+  +  C+
Sbjct: 283 YVYEDSTYDDINQWVYPLTGCL 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,603
Number of Sequences: 438
Number of extensions: 4288
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)