Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0474
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g33260.2 68414.m04112 protein kinase family protein contains ... 31 1.0
At1g33260.1 68414.m04111 protein kinase family protein contains ... 31 1.0
At1g25180.1 68414.m03127 hypothetical protein 29 3.2
At1g25112.1 68414.m03120 hypothetical protein 29 3.2
At1g25025.1 68414.m03116 hypothetical protein 29 3.2
At2g18850.1 68415.m02196 SET domain-containing protein low simil... 29 4.2
At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family pr... 29 4.2
At1g17230.1 68414.m02099 leucine-rich repeat family protein / pr... 28 7.3
At2g28520.1 68415.m03465 vacuolar proton ATPase, putative simila... 27 9.6
>At1g33260.2 68414.m04112 protein kinase family protein contains
Pfam profile: PF00069: Eukaryotic protein kinase domain
Length = 348
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 50 DVDDMKSWLATIKYCMRSPPTAQPPA 127
D++++K+ L +C+RSPP+ +P A
Sbjct: 300 DLEEVKTMLRVAAFCLRSPPSLRPSA 325
>At1g33260.1 68414.m04111 protein kinase family protein contains
Pfam profile: PF00069: Eukaryotic protein kinase domain
Length = 349
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 50 DVDDMKSWLATIKYCMRSPPTAQPPA 127
D++++K+ L +C+RSPP+ +P A
Sbjct: 301 DLEEVKTMLRVAAFCLRSPPSLRPSA 326
>At1g25180.1 68414.m03127 hypothetical protein
Length = 258
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 361 AHVQFPGPRKTPPHDRQRRWSV*SSASMVPERARYARALQSSRHPAG--VGWRC*RHAC- 531
AH + +PP R SV SS+S P +A AR L ++PA V H
Sbjct: 37 AHPSQAARQLSPPKYPASR-SVSSSSSAHPSQA--ARQLSPPKYPASRSVSNSSSAHPSQ 93
Query: 532 AVRRLPRPTRPATSSEGLT*HTHPHTHKRDI 624
A R+L RP PA+ S + HP R +
Sbjct: 94 AARQLTRPKYPASRSVSSSSSAHPSQADRQL 124
>At1g25112.1 68414.m03120 hypothetical protein
Length = 258
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 361 AHVQFPGPRKTPPHDRQRRWSV*SSASMVPERARYARALQSSRHPAG--VGWRC*RHAC- 531
AH + +PP R SV SS+S P +A AR L ++PA V H
Sbjct: 37 AHPSQAARQLSPPKYPASR-SVSSSSSAHPSQA--ARQLSPPKYPASRSVSNSSSAHPSQ 93
Query: 532 AVRRLPRPTRPATSSEGLT*HTHPHTHKRDI 624
A R+L RP PA+ S + HP R +
Sbjct: 94 AARQLTRPKYPASRSVSSSSSAHPSQADRQL 124
>At1g25025.1 68414.m03116 hypothetical protein
Length = 258
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 361 AHVQFPGPRKTPPHDRQRRWSV*SSASMVPERARYARALQSSRHPAG--VGWRC*RHAC- 531
AH + +PP R SV SS+S P +A AR L ++PA V H
Sbjct: 37 AHPSQAARQLSPPKYPASR-SVSSSSSAHPSQA--ARQLSPPKYPASRSVSNSSSAHPSQ 93
Query: 532 AVRRLPRPTRPATSSEGLT*HTHPHTHKRDI 624
A R+L RP PA+ S + HP R +
Sbjct: 94 AARQLTRPKYPASRSVSSSSSAHPSQADRQL 124
>At2g18850.1 68415.m02196 SET domain-containing protein low
similarity to ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit N-methyltransferase
I [Spinacia oleracea] GI:3403236; contains Pfam profile
PF00856: SET domain
Length = 448
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = -1
Query: 493 DGVNSEVLEHIEHVREP*MLNSTLTTFADGHAEVFCAALEIEREHVLPTSRFTLPDEVTS 314
DG+ SE + + +RE L+S + D E FC L + ++ L DE+
Sbjct: 217 DGITSETMLLLWTMREKHNLDSKFKPYFDSLQENFCTGLSFGVDAIMELDGTLLLDEIMQ 276
Query: 313 MRRM 302
+ +
Sbjct: 277 AKEL 280
>At1g59640.2 68414.m06708 basic helix-loop-helix (bHLH) family
protein
Length = 343
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 722 AVYFIVEWPGLSSKGKIASLSMYVCISYSVCVCMSRLCVCGC 597
+++F ++ LS + SL +Y S+ C S LC C C
Sbjct: 233 SIFFTKQYMFLSRYSRGRSLDVYAVRSFKHCNKRSDLCFCSC 274
>At1g17230.1 68414.m02099 leucine-rich repeat family protein / protein
kinase family protein contains protein kinase domain,
Pfam:PF00069; contains leucine-rich repeats, Pfam:PF00560
Length = 1133
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 553 PTRPATSSEGLT*HTHPHTHKRDIHTHTEYDIHTYI 660
P A SS+G+ H H HTH + T D H I
Sbjct: 1091 PLEEANSSKGMYLHIHTHTHTLLCNFRTFCDSHMNI 1126
>At2g28520.1 68415.m03465 vacuolar proton ATPase, putative similar
to Swiss-Prot:Q93050 vacuolar proton translocating
ATPase 116 kDa subunit A isoform 1 (Clathrin-coated
vesicle/synaptic vesicle proton pump 116 kDa subunit,
Vacuolar proton pump subunit 1, Vacuolar adenosine
triphosphatase subunit Ac116) [Homo sapiens]
Length = 817
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 592 HTHPHTHKRDIHTHTEYDIHTYIDSDAILPLEDNPGHS 705
+TH + ++H T Y + +I++ ++L E NPGHS
Sbjct: 149 NTHAIGEEIELHEST-YSNNGFIETASLLEQEMNPGHS 185
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,926,019
Number of Sequences: 28952
Number of extensions: 333915
Number of successful extensions: 926
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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