Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0473
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 238 2e-62
BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 237 3e-62
AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 237 3e-62
DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 227 4e-59
AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 225 1e-58
AY286300-1|AAP37402.1| 332|Homo sapiens lactate dehydrogenase C... 56 2e-07
U13680-1|AAA21348.1| 332|Homo sapiens lactate dehydrogenase-C p... 55 2e-07
BC090043-1|AAH90043.1| 332|Homo sapiens lactate dehydrogenase C... 55 2e-07
BC064388-1|AAH64388.1| 332|Homo sapiens lactate dehydrogenase C... 55 2e-07
BC019249-1|AAH19249.3| 332|Homo sapiens lactate dehydrogenase C... 55 2e-07
BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein. 55 2e-07
AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase p... 55 2e-07
AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens ... 55 2e-07
J02938-1|AAA59507.1| 332|Homo sapiens LDHC protein. 54 5e-07
M24515-1|AAA59508.1| 266|Homo sapiens lactate dehydrogenase-C p... 52 2e-06
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 1.2
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 1.2
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 1.2
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 1.2
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 1.2
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 5.0
>CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein.
Length = 338
Score = 238 bits (582), Expect = 2e-62
Identities = 116/199 (58%), Positives = 148/199 (74%)
Frame = +3
Query: 72 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 251
M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 252 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 431
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 432 NASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVR 611
NA+IV + + AQ+ P+A++ +I NPVNST+PI +EV KK GVY+PN++ GVTTLD+VR
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVR 176
Query: 612 AATFVGEINGVDPTSVAVP 668
A TFV E+ G+DP V VP
Sbjct: 177 ANTFVAELKGLDPARVNVP 195
>BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,
NAD (mitochondrial) protein.
Length = 338
Score = 237 bits (580), Expect = 3e-62
Identities = 116/199 (58%), Positives = 147/199 (73%)
Frame = +3
Query: 72 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 251
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 252 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 431
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 432 NASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVR 611
NA+IV + + AQ+ P+A++ +I NPVNST+PI +EV KK GVY+PN++ GVTTLD+VR
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVR 176
Query: 612 AATFVGEINGVDPTSVAVP 668
A TFV E+ G+DP V VP
Sbjct: 177 ANTFVAELKGLDPARVNVP 195
>AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase
precursor protein.
Length = 338
Score = 237 bits (580), Expect = 3e-62
Identities = 116/199 (58%), Positives = 147/199 (73%)
Frame = +3
Query: 72 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 251
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 252 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 431
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 432 NASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVR 611
NA+IV + + AQ+ P+A++ +I NPVNST+PI +EV KK GVY+PN++ GVTTLD+VR
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVR 176
Query: 612 AATFVGEINGVDPTSVAVP 668
A TFV E+ G+DP V VP
Sbjct: 177 ANTFVAELKGLDPARVNVP 195
>DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate
dehydrogenase 2, NAD protein.
Length = 305
Score = 227 bits (554), Expect = 4e-59
Identities = 109/175 (62%), Positives = 132/175 (75%)
Frame = +3
Query: 144 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGH 323
Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+
Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGY 59
Query: 324 KGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAII 503
GPE+L +K DVVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++ +I
Sbjct: 60 LGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVI 119
Query: 504 TNPVNSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGVDPTSVAVP 668
NPVNST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV E+ G+DP V VP
Sbjct: 120 ANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVP 174
>AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 225 bits (549), Expect = 1e-58
Identities = 106/161 (65%), Positives = 129/161 (80%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 365
IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+ GPE+L +K D
Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCD 72
Query: 366 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEV 545
VVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++ +I NPVNST+PI +EV
Sbjct: 73 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEV 132
Query: 546 LKKAGVYDPNRVLGVTTLDVVRAATFVGEINGVDPTSVAVP 668
KK GVY+PN++ GVTTLD+VRA TFV E+ G+DP V VP
Sbjct: 133 FKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVP 173
>AY286300-1|AAP37402.1| 332|Homo sapiens lactate dehydrogenase C
protein.
Length = 332
Score = 55.6 bits (128), Expect = 2e-07
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIA-PVTPGVAADLSHMN---TPAKVSGHKGPEELSAAI 353
+G A+ + L LAL D+A G DL H + + +K++ KG +SA
Sbjct: 31 VGMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKG-YSVSA-- 87
Query: 354 KDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPI 533
++ +V++ AG ++ G TR L N +I++ I +I +P + +++NPV+ I
Sbjct: 88 -NSRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVD----I 142
Query: 534 ASEVLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
+ ++ K RV+G LD R +GE GV PTS
Sbjct: 143 LTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTS 184
>U13680-1|AAA21348.1| 332|Homo sapiens lactate dehydrogenase-C
protein.
Length = 332
Score = 55.2 bits (127), Expect = 2e-07
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIA-PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDA 362
+G A+ + L LAL D+A G DL H + S ++ S + ++
Sbjct: 31 VGMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKDYSVSA-NS 89
Query: 363 DVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASE 542
+V++ AG ++ G TR L N +I++ I +I +P + +++NPV+ I +
Sbjct: 90 RIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVD----ILTY 145
Query: 543 VLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
++ K RV+G LD R +GE GV PTS
Sbjct: 146 IVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTS 184
>BC090043-1|AAH90043.1| 332|Homo sapiens lactate dehydrogenase C
protein.
Length = 332
Score = 55.2 bits (127), Expect = 2e-07
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIA-PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDA 362
+G A+ + L LAL D+A G DL H + S ++ S + ++
Sbjct: 31 VGMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKDYSVSA-NS 89
Query: 363 DVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASE 542
+V++ AG ++ G TR L N +I++ I +I +P + +++NPV+ I +
Sbjct: 90 RIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVD----ILTY 145
Query: 543 VLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
++ K RV+G LD R +GE GV PTS
Sbjct: 146 IVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTS 184
>BC064388-1|AAH64388.1| 332|Homo sapiens lactate dehydrogenase C
protein.
Length = 332
Score = 55.2 bits (127), Expect = 2e-07
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIA-PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDA 362
+G A+ + L LAL D+A G DL H + S ++ S + ++
Sbjct: 31 VGMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKDYSVSA-NS 89
Query: 363 DVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASE 542
+V++ AG ++ G TR L N +I++ I +I +P + +++NPV+ I +
Sbjct: 90 RIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVD----ILTY 145
Query: 543 VLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
++ K RV+G LD R +GE GV PTS
Sbjct: 146 IVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTS 184
>BC019249-1|AAH19249.3| 332|Homo sapiens lactate dehydrogenase C
protein.
Length = 332
Score = 55.2 bits (127), Expect = 2e-07
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIA-PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDA 362
+G A+ + L LAL D+A G DL H + S ++ S + ++
Sbjct: 31 VGMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKDYSVSA-NS 89
Query: 363 DVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASE 542
+V++ AG ++ G TR L N +I++ I +I +P + +++NPV+ I +
Sbjct: 90 RIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVD----ILTY 145
Query: 543 VLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
++ K RV+G LD R +GE GV PTS
Sbjct: 146 IVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTS 184
>BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein.
Length = 234
Score = 55.2 bits (127), Expect = 2e-07
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Frame = +3
Query: 123 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMN 299
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 300 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 479
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 480 PKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
P + I+TNPV+ I + V K + NRV+G LD R F+G+ G+ S
Sbjct: 129 PHCKLLIVTNPVD----ILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGIHSES 184
>AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase
protein.
Length = 332
Score = 55.2 bits (127), Expect = 2e-07
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Frame = +3
Query: 123 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMN 299
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 300 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 479
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 480 PKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
P + I+TNPV+ I + V K + NRV+G LD R F+G+ G+ S
Sbjct: 129 PHCKLLIVTNPVD----ILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGIHSES 184
>AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ43406 fis, clone OCBBF2019823, highly similar
to Homo sapiens lactate dehydrogenase A -like (LDHL). ).
Length = 332
Score = 55.2 bits (127), Expect = 2e-07
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Frame = +3
Query: 123 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMN 299
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 300 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 479
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 480 PKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
P + I+TNPV+ I + V K + NRV+G LD R F+G+ G+ S
Sbjct: 129 PHCKLLIVTNPVD----ILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGIHSES 184
>J02938-1|AAA59507.1| 332|Homo sapiens LDHC protein.
Length = 332
Score = 54.0 bits (124), Expect = 5e-07
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +3
Query: 186 IGQPLALLLKQNPLVTRLALYDIA-PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDA 362
+G A+ + L LAL D+A G DL H + S ++ S + ++
Sbjct: 31 VGMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKVTSGKDYSVSA-NS 89
Query: 363 DVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASE 542
+V++ AG ++ G TR L N +I++ I +I +P + +++NPV+ I +
Sbjct: 90 RIVIVTAGARQQEGETRLALVQRNVAIMKIIIPAIVHYSPDCKILVVSNPVD----ILTY 145
Query: 543 VLKKAGVYDPNRVLGV-TTLDVVRAATFVGEINGVDPTS 656
++ K RV+G LD R +GE GV PTS
Sbjct: 146 IVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTS 184
>M24515-1|AAA59508.1| 266|Homo sapiens lactate dehydrogenase-C
protein.
Length = 266
Score = 52.0 bits (119), Expect = 2e-06
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +3
Query: 225 LVTRLALYDIA-PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKP 401
L LAL D+A G DL H + S ++ S + ++ +V++ AG ++
Sbjct: 2 LADELALVDVALDKLKGEMMDLQHGSLFFSTSKVTSGKDYSVSA-NSRIVIVTAGARQQE 60
Query: 402 GMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNSTVPIASEVLKKAGVYDPNRV 581
G TR L N +I++ I +I +P + +++NPV+ I + ++ K RV
Sbjct: 61 GETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVD----ILTYIVWKISGLPVTRV 116
Query: 582 LGV-TTLDVVRAATFVGEINGVDPTS 656
+G LD R +GE GV PTS
Sbjct: 117 IGSGCNLDSARFRYLIGEKLGVHPTS 142
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 168 RPPL*SSSVMWWKSSLHHFVQQ 103
RPPL SS WW+SSL +F QQ
Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 168 RPPL*SSSVMWWKSSLHHFVQQ 103
RPPL SS WW+SSL +F QQ
Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 168 RPPL*SSSVMWWKSSLHHFVQQ 103
RPPL SS WW+SSL +F QQ
Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 168 RPPL*SSSVMWWKSSLHHFVQQ 103
RPPL SS WW+SSL +F QQ
Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 168 RPPL*SSSVMWWKSSLHHFVQQ 103
RPPL SS WW+SSL +F QQ
Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 191 PAFGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 322
P G TE + G A + ++ +P PFP E PS + P
Sbjct: 761 PPTGAETEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 804
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,223,328
Number of Sequences: 237096
Number of extensions: 2764996
Number of successful extensions: 7613
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7599
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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