Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0472
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 221 2e-57
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 221 2e-57
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 221 2e-57
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 221 2e-57
AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein. 221 2e-57
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 192 9e-49
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 36 0.21
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 36 0.21
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 36 0.21
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 36 0.21
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 36 0.21
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 36 0.21
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 36 0.21
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 36 0.21
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 36 0.21
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 36 0.21
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 36 0.21
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 36 0.21
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 35 0.27
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 35 0.27
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 35 0.27
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 35 0.27
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 35 0.27
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 35 0.27
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 35 0.27
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 34 0.48
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 34 0.48
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 34 0.48
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 34 0.48
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 34 0.48
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 33 0.83
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 33 0.83
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 33 0.83
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 33 0.83
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 33 0.83
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 33 1.1
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 33 1.1
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 33 1.1
X63692-1|CAA45219.1| 1616|Homo sapiens DNA (cytosine-5-)-methylt... 32 1.9
BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein. 32 1.9
BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein. 32 1.9
AF180682-1|AAF23609.1| 1280|Homo sapiens DNA (cytosine-5)-methyl... 32 1.9
AC010077-1|AAD54507.1| 966|Homo sapiens MTDM_HUMAN [AA 1- 966] ... 32 1.9
AB209413-1|BAD92650.1| 1606|Homo sapiens DNA (cytosine-5-)-methy... 32 1.9
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 32 2.5
BC054873-1|AAH54873.1| 122|Homo sapiens ACF protein protein. 32 2.5
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 32 2.5
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 32 2.5
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 32 2.5
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 32 2.5
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 32 2.5
AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation... 32 2.5
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 32 2.5
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 32 2.5
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 32 2.5
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 32 2.5
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 32 2.5
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 32 2.5
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 31 3.4
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 31 3.4
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 31 3.4
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 31 3.4
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 31 3.4
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 31 3.4
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 31 3.4
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 31 3.4
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 31 3.4
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 31 3.4
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 31 3.4
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 31 3.4
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 31 3.4
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 31 3.4
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 31 4.5
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 5.9
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 5.9
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 31 5.9
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 30 7.8
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 221 bits (541), Expect = 2e-57
Identities = 101/186 (54%), Positives = 137/186 (73%)
Frame = +1
Query: 151 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 330
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-ED 226
Query: 331 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 510
G T GYIFLEY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QP
Sbjct: 227 GKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQP 286
Query: 511 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 690
FK +L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP G
Sbjct: 287 FKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKG 346
Query: 691 TYLATF 708
TYLATF
Sbjct: 347 TYLATF 352
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 221 bits (541), Expect = 2e-57
Identities = 101/186 (54%), Positives = 137/186 (73%)
Frame = +1
Query: 151 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 330
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-ED 226
Query: 331 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 510
G T GYIFLEY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QP
Sbjct: 227 GKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQP 286
Query: 511 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 690
FK +L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP G
Sbjct: 287 FKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKG 346
Query: 691 TYLATF 708
TYLATF
Sbjct: 347 TYLATF 352
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 221 bits (541), Expect = 2e-57
Identities = 101/186 (54%), Positives = 137/186 (73%)
Frame = +1
Query: 151 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 330
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-ED 226
Query: 331 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 510
G T GYIFLEY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QP
Sbjct: 227 GKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQP 286
Query: 511 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 690
FK +L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP G
Sbjct: 287 FKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKG 346
Query: 691 TYLATF 708
TYLATF
Sbjct: 347 TYLATF 352
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 221 bits (541), Expect = 2e-57
Identities = 101/186 (54%), Positives = 137/186 (73%)
Frame = +1
Query: 151 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 330
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-ED 226
Query: 331 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 510
G T GYIFLEY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QP
Sbjct: 227 GKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQP 286
Query: 511 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 690
FK +L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP G
Sbjct: 287 FKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKG 346
Query: 691 TYLATF 708
TYLATF
Sbjct: 347 TYLATF 352
>AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein.
Length = 385
Score = 221 bits (541), Expect = 2e-57
Identities = 101/186 (54%), Positives = 137/186 (73%)
Frame = +1
Query: 151 LLADILEQKPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTEN 330
LL D+L+ +P+E+DG ++V+VVD PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+
Sbjct: 168 LLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-ED 226
Query: 331 GLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQP 510
G T GYIFLEY++P +A +AVK + KLDKQHTF VNLFTDF KY I EW+ P QP
Sbjct: 227 GKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQP 286
Query: 511 FKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLG 690
FK +L+++L + + DQ+ V +G ++ N + +P+ ++ER WTETY WSP G
Sbjct: 287 FKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKG 346
Query: 691 TYLATF 708
TYLATF
Sbjct: 347 TYLATF 352
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 192 bits (469), Expect = 9e-49
Identities = 89/161 (55%), Positives = 117/161 (72%)
Frame = +1
Query: 226 PQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 405
PQVGP+RLEKL++VI+KIFSKFGKI N++YP E+G T GYIFLEY++P +A +AVK +
Sbjct: 2 PQVGPDRLEKLKNVIHKIFSKFGKITNDFYPE-EDGKTKGYIFLEYASPAHAVDAVKNAD 60
Query: 406 NCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIG 585
KLDKQHTF VNLFTDF KY I EW+ P QPFK +L+++L + + DQ+ V
Sbjct: 61 GYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFE 120
Query: 586 TGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATF 708
+G ++ N + +P+ ++ER WTETY WSP GTYLATF
Sbjct: 121 SGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATF 161
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 18 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 77
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 78 QKKVERQAELKRKFE 92
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/75 (21%), Positives = 41/75 (54%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ ++FS+FGK ++ NG + G+ F+ Y ++A +AV+ N ++ + F+
Sbjct: 207 LKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQAELKRKFE 281
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 154 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 213
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 214 AVLAPWPR--PPPRRFSPP 230
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 100 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 159
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 160 AVLAPWPR--PPPRRFSPP 176
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.27
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENG--LTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLV 441
I +IFS +GKI P L+ GY ++E+ NP A +A+K + ++D Q
Sbjct: 177 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 236
Query: 442 NLFTDFQKYSDIPKEWEPP 498
+ + + P+ + PP
Sbjct: 237 AVLAPWPR--PPPRRFSPP 253
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 182 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 241
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 242 QKKVERQTELKRKFE 256
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ +++E
Sbjct: 267 QKKVERQTELKRKFE 281
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.83
Identities = 15/75 (20%), Positives = 39/75 (52%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNL 447
+ +F KFG ++ T E+G + G+ F+ + ++A +AV N +L+ + ++
Sbjct: 207 LKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Query: 448 FTDFQKYSDIPKEWE 492
++ +++ + +E
Sbjct: 267 QKKVERQTELKRTFE 281
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 414
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 414
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 QSVINKIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCK 414
Q + +FS+FG+I+N + GL+ G F+ + A EA+ + N K
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHK 171
>X63692-1|CAA45219.1| 1616|Homo sapiens DNA
(cytosine-5-)-methyltransferase protein.
Length = 1616
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 402
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 896 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 953
Query: 403 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 519
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 954 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 993
>BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.
Length = 1632
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 402
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 912 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 969
Query: 403 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 519
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 970 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 1009
>BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.
Length = 1511
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 402
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 791 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 848
Query: 403 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 519
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 849 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 888
>AF180682-1|AAF23609.1| 1280|Homo sapiens DNA
(cytosine-5)-methyltransferase protein.
Length = 1280
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 402
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 560 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 617
Query: 403 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 519
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 618 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 657
>AC010077-1|AAD54507.1| 966|Homo sapiens MTDM_HUMAN [AA 1- 966]
protein.
Length = 966
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 402
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 775 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 832
Query: 403 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 519
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 833 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 872
>AB209413-1|BAD92650.1| 1606|Homo sapiens DNA
(cytosine-5-)-methyltransferase 1 variant protein.
Length = 1606
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 CPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKAT 402
C ++ R +++ V+ ++ +++ YY T+NG+ Y P+ +K +
Sbjct: 883 CARLAEMRQKEIPRVLEQLEDLDSRVL--YYSATKNGILYRVGDGVYLPPEAFTFNIKLS 940
Query: 403 NNCKLDKQHTFLVNLFTD-FQKYSDIPKEWEPPAPQPFKV 519
+ K ++ +L+ + ++KYSD K AP+P+++
Sbjct: 941 SPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRI 980
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>BC054873-1|AAH54873.1| 122|Homo sapiens ACF protein protein.
Length = 122
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 86 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 129
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation
factor protein.
Length = 201
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 86 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 129
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 61 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 104
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 286 KFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
K GKI NG GY F+ +SN A A+K NN ++
Sbjct: 78 KIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYEI 121
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 224 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 278
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 31.5 bits (68), Expect = 3.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 420
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 242 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 296
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 199 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 253
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 199 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 253
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 182 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 236
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 225 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 279
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 3.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 420
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 3.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 420
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 31.5 bits (68), Expect = 3.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 420
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 287 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 321
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 31.5 bits (68), Expect = 3.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 420
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 408 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 442
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 225 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 279
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 239 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 293
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 268 INKIFSKFGKIVN---EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQH 429
I +F FGKI + PTT G GY F+EY Q++ +AV + N L Q+
Sbjct: 242 IKSVFEAFGKIKSCTLARDPTT--GKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQY 296
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 31.5 bits (68), Expect = 3.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLD 420
P +NG + GY F+E+++ ++A EA+ + N +++
Sbjct: 515 PQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIE 549
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 268 INKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 405
+ K FS FG I+N E G + + F+ +S+P+ A+AV A N
Sbjct: 130 LQKEFSPFG-IINSANVMMEGGCSKRFGFVCFSSPEEVAKAVTAMN 174
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 274 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 274 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 274 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 274 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 274 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 274 KIFSKFGKIVNEYYPTTE-NGLTTGYIFLEYSNPQNAAEAVKATNNCKL 417
++F + G +VN + P G GY F+E+ + ++A A+K N KL
Sbjct: 31 ELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKL 79
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 30.7 bits (66), Expect = 5.9
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 316 PTTENGLTTGYIFLEYSNPQNAAEAVKATN 405
P +NG + GY F+E+++ ++A EA+ + N
Sbjct: 492 PQNQNGKSKGYAFIEFASFEDAKEALNSCN 521
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 232 VGPERLEKLQSVINKIFSKFGKIVN-EYYPTTENGLTTGYIFLEYSNPQNAAEAVKATN 405
VG E + + IFS+ G +V+ E G GY F EY + + A A++ N
Sbjct: 20 VGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,492,943
Number of Sequences: 237096
Number of extensions: 2710476
Number of successful extensions: 6903
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 6488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6875
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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