Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0471
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89) 33 0.15
SB_11107| Best HMM Match : Plasmodium_HRP (HMM E-Value=10) 31 1.1
SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 1.1
SB_9576| Best HMM Match : F5_F8_type_C (HMM E-Value=0.0016) 30 1.4
SB_48578| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_44358| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_26825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_58158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_23037| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 28 5.8
SB_41119| Best HMM Match : Sec23_helical (HMM E-Value=7.4e-37) 28 7.6
SB_23749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89)
Length = 251
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 18 HGFHQFSRYSRQHHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
+ H +R++ H+ R HN P+ RH P+ ++ + N + +TRH S
Sbjct: 170 NSLHNTTRHNSLHNTTR-HNSLPNTTRHNSLPNTTRHNSLTNTTRHNSLPNTTRHNS 225
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 18 HGFHQFSRYSRQHHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
+ H +R++ H+ R HN P+ RH + + + N + +TRH S
Sbjct: 134 NSLHNTTRHNSLHNTTR-HNSLPNTTRHNSLHNTTRHNSLHNTTRHNSLHNTTRHNS 189
>SB_11107| Best HMM Match : Plasmodium_HRP (HMM E-Value=10)
Length = 296
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 45 SRQHHPPR--RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
+R + PP RHN P+ RH S ++ + N + +TRH S
Sbjct: 184 ARHNSPPNTTRHNSLPNTTRHNSLHSTTRHNSLNNTTRHNSLTNTTRHNS 233
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN + RH P+ A ++ + N + +TRH S
Sbjct: 95 RHNSLTNTTRHNSLPNTARHNSLTNTTRHNSLTNTTRHNS 134
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ A + N + +TRH S
Sbjct: 167 RHNSLPNTTRHNSLPNTARHNSPPNTTRHNSLPNTTRHNS 206
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN + RH P+ A ++ + N + +TRH S
Sbjct: 230 RHNSLTNTTRHNSLPNTARHNSLTNTTRHNSLTNTTRHNS 269
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ A + + N + + RH S
Sbjct: 149 RHNSLPNITRHNSLPNTARHNSLPNTTRHNSLPNTARHNS 188
>SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 57 HPPRRHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
H RHN P+ RH P+ + + N + +TRH S
Sbjct: 33 HNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRYNSLPNTTRHNS 76
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +3
Query: 18 HGFHQFSRYSRQHHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
+ H +R++ H+ R HN P+ RH + ++ + N + +TRH S
Sbjct: 120 NSLHNTTRHNSLHNTTR-HNSLPNTTRHNSLHNTTRHNSLTNTSRHNSLHNTTRHNS 175
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 73 RHNSPPNTTRHNSLPNTTRHNSLHNTTRHNCLHNTTRHNS 112
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 295 MYMKPEKFQKLQQLNPNFASLINFRHTPKDITRYPVSNPHPVETEVAFMHDALMFITPSQ 474
M++ P + + Q PN IN P+D+ YP P H MFI P++
Sbjct: 1390 MFVNPTRIPRDLQHYPNM--FINPTRIPRDLQHYPNMFIKPTRIPRDLQHYPNMFINPTR 1447
Query: 475 ILGLFKDSPSM 507
I + P+M
Sbjct: 1448 IPRDLQHYPNM 1458
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 295 MYMKPEKFQKLQQLNPNFASLINFRHTPKDITRYPVSNPHPVETEVAFMHDALMFITPSQ 474
M+++P + L+ L +N P+D+ YP +P H MFI P++
Sbjct: 1373 MFIRPTRI--LRDLQHYSNMFVNPTRIPRDLQHYPNMFINPTRIPRDLQHYPNMFIKPTR 1430
Query: 475 ILGLFKDSPSM 507
I + P+M
Sbjct: 1431 IPRDLQHYPNM 1441
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 295 MYMKPEKFQKLQQLNPNFASLINFRHTPKDITRYPVSNPHPVETEVAFMHDALMFITPSQ 474
M++ P + + Q PN I P+D+ YP +P H MFI P++
Sbjct: 1407 MFINPTRIPRDLQHYPNM--FIKPTRIPRDLQHYPNMFINPTRIPRDLQHYPNMFINPTR 1464
Query: 475 I 477
I
Sbjct: 1465 I 1465
>SB_9576| Best HMM Match : F5_F8_type_C (HMM E-Value=0.0016)
Length = 491
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 127 LYPYQVNSKLIPLLNQLGIGVTSYGTSPHPHAAHKAIETHLLFEHWN 267
L P Q+ IP+ N+ T + T PHP A ++ + F HW+
Sbjct: 336 LSPMQIPESCIPI-NRCSTKATGWMTQPHPDARDGVVQRTVCF-HWD 380
>SB_48578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ ++ + N + +TRH S
Sbjct: 64 RHNSLPNTTRHNSLPNTTRHNSLTNTTRHNSLPNTTRHNS 103
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 55 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLTNTTRHNS 94
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 46 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNS 85
>SB_44358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ ++ + N + +TRH S
Sbjct: 36 RHNSLPNTTRHNSLPNTTRHNSLTNTTRHNSLPNTTRHNS 75
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 27 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLTNTTRHNS 66
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 18 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNS 57
>SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ ++ + N + +TRH S
Sbjct: 19 RHNSLPNTTRHNSLPNTTRHNSLNNTTRHNSLPNTTRHNS 58
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 91 RHNSLPNTTRHNSLPNTTRHNSLHNTTRHNSLTNTTRHNS 130
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 46 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNS 85
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 55 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNS 94
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 64 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNS 103
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 73 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLPNTTRHNS 112
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 10 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLNNTTRHNS 49
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRS 188
RHN P+ RH P+ + + N + +TRH S
Sbjct: 82 RHNSLPNTTRHNSLPNTTRHNSLPNTTRHNSLHNTTRHNS 121
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 69 RHNGSPSGNRHQQFPSQASTLPISGKFQANPIAQSTRHRSHLLWHFTSSSC 221
RHN P+ RH P+ + + N + +TRH S L + T ++C
Sbjct: 145 RHNSLPNTTRHNSPPNTTRHNSLPNTTRHNSLHNTTRHNS--LHNTTRTTC 193
>SB_26825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 474 LGRGNEHESVVHERYFSFYRMRVANGVPSDVLWGVPEVNEGSKVWV 337
+G +E E +V R S +V+ G P V W VP+ W+
Sbjct: 55 IGGKDEVELIVQNRSMSLSASKVSYGKPVTVSWSVPQDEATEMDWI 100
>SB_58158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 328 QQLNPNFASLINFRHTPKDITRYPVSNPHPVETEVA 435
++L+P+ A L F PK T+ S HP+ET ++
Sbjct: 518 RKLSPSTALLAKFAFRPKTSTQGECSRSHPLETPIS 553
>SB_23037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 175 LGIGVTS---YGTSPHPHAAHKAIETHLLFEHWNHLARVP 285
+G+G+T+ Y T PH A+ + T L F ++ + R P
Sbjct: 28 MGVGLTAVICYYTQADPHTAYSYVITRLRFYYYYYFRRAP 67
>SB_22348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 175 LGIGVTS---YGTSPHPHAAHKAIETHLLFEHWNHLARVP 285
+G+G+T+ Y T PH A+ + T L F ++ + R P
Sbjct: 210 MGVGLTAVICYYTQADPHTAYSYVITRLRFYYYYYFRRAP 249
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +1
Query: 334 LNPNFASLINFRHTPKDITRYPVSNPHPVETEVAFMHDALMFITPS-QILGLFKDSPSMT 510
L+P+ A+ + T ++I+++ ++ +E + H+ + Q +G + PS++
Sbjct: 146 LSPDLAAGPHVSATKREISKHEGTDLAELEELIRTNHEGPSIEDETDQPMGEEYEDPSIS 205
Query: 511 SLYCSLIVPAEAAYGVPSLFPDLYSYTIKDDQLVYTLEGNATGNYTQ 651
CSL + + PS +L S I + +L+G+ NY++
Sbjct: 206 GCLCSLRLDISSGEVHPSAGSNLVSPRIAHFNHLESLKGDLLANYSR 252
>SB_41119| Best HMM Match : Sec23_helical (HMM E-Value=7.4e-37)
Length = 875
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 439 MHDALMF-ITPSQILGLFKDSPSMTSLYCSLIVPAEAAYGVPSLFPDLYSYTIK 597
++ MF + SQ L +F +SP T+ Y ++ + + + P LYSY+ +
Sbjct: 507 LYPQFMFHLRRSQFLQVFNNSPDETAYYRHILNREDVTNSLIMIQPILYSYSFQ 560
>SB_23749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 568 FPDLYSYTIKDDQLVYTLEGNATGNYTQP 654
FPD+Y+YT D YTL T P
Sbjct: 52 FPDIYAYTPFPDMYAYTLSPTCTRTPLSP 80
>SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 27 HQFSRYSR-QHHPPRRHNGSPSGNRHQQFPSQASTL 131
H ++RY + Q HP R+ +P +RH P + T+
Sbjct: 85 HNYTRYVKTQLHPIRQETITPETSRHNYTPKRHDTI 120
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 18 HGFHQFSRYSRQHHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQAN 158
+GF S Y H NG+P ++ +FPS+ KF+ N
Sbjct: 309 YGFVNMSNYEEACHAICCLNGTPQHGKYSRFPSKHLKTTNLSKFENN 355
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,177,493
Number of Sequences: 59808
Number of extensions: 525332
Number of successful extensions: 1631
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -