Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0469
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 258 VYLEELAEATKPR 296
           ++LEEL+E  KPR
Sbjct: 317 LFLEELSEIFKPR 329


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +1

Query: 241 IMKNS*YI*KNLLKQLNLAFT*TSKHWNRHFSKDYFCKMLSLMLFQKV 384
           ++K    I K L+ ++      T K  +      YFCK+     F K+
Sbjct: 543 VLKRRTEIYKGLIDRIKSREKLTMKFHDGEVDASYFCKLPEKFRFVKI 590


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 197 NIFDDVVYNFCFFINLDNLKLILL 126
           NIFD V     F +N+ + KLI L
Sbjct: 182 NIFDQVGSLGMFHVNMSHNKLINL 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,993
Number of Sequences: 336
Number of extensions: 2201
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)