Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0469
(554 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein. 38 0.024
BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein. 38 0.024
BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein. 38 0.024
BC062695-1|AAH62695.1| 484|Homo sapiens UBE4A protein protein. 38 0.024
BC052643-1|AAH52643.1| 351|Homo sapiens UBE4A protein protein. 38 0.024
BC030973-1|AAH30973.1| 392|Homo sapiens UBE4A protein protein. 38 0.024
AL445209-2|CAI15183.1| 726|Homo sapiens chromosome 13 open read... 31 2.7
AL139319-1|CAH70397.1| 726|Homo sapiens chromosome 13 open read... 31 2.7
AK023511-1|BAB14594.1| 460|Homo sapiens protein ( Homo sapiens ... 31 2.7
BX284632-12|CAI14287.1| 376|Homo sapiens COBW domain containing... 31 3.6
BX284632-11|CAI14288.1| 395|Homo sapiens COBW domain containing... 31 3.6
BX284632-8|CAI14284.1| 359|Homo sapiens COBW domain containing ... 31 3.6
BX255923-5|CAI94917.1| 359|Homo sapiens COBW domain containing ... 31 3.6
BX255923-4|CAI94916.1| 395|Homo sapiens COBW domain containing ... 31 3.6
BC120992-1|AAI20993.1| 395|Homo sapiens COBW domain containing ... 31 3.6
BC120991-1|AAI20992.1| 395|Homo sapiens COBW domain containing ... 31 3.6
AY344633-1|AAQ76870.1| 395|Homo sapiens COBW domain containing ... 31 3.6
AY343910-1|AAQ76868.1| 395|Homo sapiens COBW domain containing ... 31 3.6
AL353608-6|CAI41167.1| 85|Homo sapiens COBW domain containing ... 31 3.6
AL353608-4|CAI41165.1| 359|Homo sapiens COBW domain containing ... 31 3.6
AL353608-1|CAI41162.1| 395|Homo sapiens COBW domain containing ... 31 3.6
AL078621-3|CAO03555.1| 395|Homo sapiens COBW domain containing ... 31 3.6
AK124867-1|BAC85973.1| 176|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF452722-1|AAN64907.1| 395|Homo sapiens COBW domain-containing ... 31 3.6
AF293368-1|AAG10070.1| 104|Homo sapiens unknown protein. 31 3.6
AF212253-1|AAK14935.1| 376|Homo sapiens HCOBP protein. 31 3.6
>D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein.
Length = 1075
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 258 VYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVI 374
VYLEE+A + + +D +EQALF RLLLQD +++I
Sbjct: 116 VYLEEMAVELEDQDWLDMSNVEQALFARLLLQDPGNHLI 154
>BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 258 VYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVI 374
VYLEE+A + + +D +EQALF RLLLQD +++I
Sbjct: 114 VYLEEMAVELEDQDWLDMSNVEQALFARLLLQDPGNHLI 152
>BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 258 VYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVI 374
VYLEE+A + + +D +EQALF RLLLQD +++I
Sbjct: 114 VYLEEMAVELEDQDWLDMSNVEQALFARLLLQDPGNHLI 152
>BC062695-1|AAH62695.1| 484|Homo sapiens UBE4A protein protein.
Length = 484
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 258 VYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVI 374
VYLEE+A + + +D +EQALF RLLLQD +++I
Sbjct: 114 VYLEEMAVELEDQDWLDMSNVEQALFARLLLQDPGNHLI 152
>BC052643-1|AAH52643.1| 351|Homo sapiens UBE4A protein protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 258 VYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVI 374
VYLEE+A + + +D +EQALF RLLLQD +++I
Sbjct: 114 VYLEEMAVELEDQDWLDMSNVEQALFARLLLQDPGNHLI 152
>BC030973-1|AAH30973.1| 392|Homo sapiens UBE4A protein protein.
Length = 392
Score = 37.9 bits (84), Expect = 0.024
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 258 VYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVI 374
VYLEE+A + + +D +EQALF RLLLQD +++I
Sbjct: 114 VYLEEMAVELEDQDWLDMSNVEQALFARLLLQDPGNHLI 152
>AL445209-2|CAI15183.1| 726|Homo sapiens chromosome 13 open reading
frame 7 protein.
Length = 726
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 367 LDSTSCKSNLSKSACSNASKSM*MRGLVASASSSKY 260
LDS +S+ SKS C+N KS+ + GL S+ S++
Sbjct: 541 LDSMMSESDNSKSPCNNGFKSLDLDGLSKSSQGSEF 576
>AL139319-1|CAH70397.1| 726|Homo sapiens chromosome 13 open reading
frame 7 protein.
Length = 726
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 367 LDSTSCKSNLSKSACSNASKSM*MRGLVASASSSKY 260
LDS +S+ SKS C+N KS+ + GL S+ S++
Sbjct: 541 LDSMMSESDNSKSPCNNGFKSLDLDGLSKSSQGSEF 576
>AK023511-1|BAB14594.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ13449 fis, clone PLACE1003025. ).
Length = 460
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 367 LDSTSCKSNLSKSACSNASKSM*MRGLVASASSSKY 260
LDS +S+ SKS C+N KS+ + GL S+ S++
Sbjct: 275 LDSMMSESDNSKSPCNNGFKSLDLDGLSKSSQGSEF 310
>BX284632-12|CAI14287.1| 376|Homo sapiens COBW domain containing 5
protein.
Length = 376
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 347 KDILKQLFIATVTETEKQWTTHFKEDQVC 375
>BX284632-11|CAI14288.1| 395|Homo sapiens COBW domain containing 5
protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>BX284632-8|CAI14284.1| 359|Homo sapiens COBW domain containing 5
protein.
Length = 359
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 330 KDILKQLFIATVTETEKQWTTHFKEDQVC 358
>BX255923-5|CAI94917.1| 359|Homo sapiens COBW domain containing 6
protein.
Length = 359
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 330 KDILKQLFIATVTETEKQWTTHFKEDQVC 358
>BX255923-4|CAI94916.1| 395|Homo sapiens COBW domain containing 6
protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>BC120992-1|AAI20993.1| 395|Homo sapiens COBW domain containing 2
protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>BC120991-1|AAI20992.1| 395|Homo sapiens COBW domain containing 2
protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>AY344633-1|AAQ76870.1| 395|Homo sapiens COBW domain containing
protein 3 protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>AY343910-1|AAQ76868.1| 395|Homo sapiens COBW domain containing
protein 2 protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>AL353608-6|CAI41167.1| 85|Homo sapiens COBW domain containing 3
protein.
Length = 85
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 56 KDILKQLFIATVTETEKQWTTHFKEDQVC 84
>AL353608-4|CAI41165.1| 359|Homo sapiens COBW domain containing 3
protein.
Length = 359
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 330 KDILKQLFIATVTETEKQWTTHFKEDQVC 358
>AL353608-1|CAI41162.1| 395|Homo sapiens COBW domain containing 3
protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>AL078621-3|CAO03555.1| 395|Homo sapiens COBW domain containing 2
protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>AK124867-1|BAC85973.1| 176|Homo sapiens protein ( Homo sapiens
cDNA FLJ42877 fis, clone BRHIP2029393, highly similar
to Homo sapiens COBW-like protein. ).
Length = 176
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 147 KDILKQLFIATVTETEKQWTTHFKEDQVC 175
>AF452722-1|AAN64907.1| 395|Homo sapiens COBW domain-containing
protein protein.
Length = 395
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 366 KDILKQLFIATVTETEKQWTTHFKEDQVC 394
>AF293368-1|AAG10070.1| 104|Homo sapiens unknown protein.
Length = 104
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 75 KDILKQLFIATVTETEKQWTTHFKEDQVC 103
>AF212253-1|AAK14935.1| 376|Homo sapiens HCOBP protein.
Length = 376
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 268 KNLLKQLNLA-FT*TSKHWNRHFSKDYFC 351
K++LKQL +A T T K W HF +D C
Sbjct: 347 KDILKQLFIATVTETEKQWTTHFKEDQVC 375
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,804,348
Number of Sequences: 237096
Number of extensions: 1133243
Number of successful extensions: 2308
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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