Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0469
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p pro...    32   0.60 
AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA ...    32   0.60 
AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-P...    32   0.60 
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    29   3.2  

>AY058795-1|AAL14024.1| 1412|Drosophila melanogaster SD10676p protein.
          Length = 1412

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +3

Query: 216  VNAVENRPNNEKQLVYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVIPKGTKVY 395
            +N+  +R  NE  L  LE L EATK   HID   +   L       D     +   TK+ 
Sbjct: 926  INSACDRYKNEGLLQPLEGLIEATKDLGHIDRNKIYYTLLLSYDKADEAEKALGLWTKMQ 985

Query: 396  KEHVIEKHVFL 428
            +E+V     FL
Sbjct: 986  EENVTPNDAFL 996


>AF327844-1|AAK50882.1| 1412|Drosophila melanogaster bicoid mRNA
            stability factor protein.
          Length = 1412

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +3

Query: 216  VNAVENRPNNEKQLVYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVIPKGTKVY 395
            +N+  +R  NE  L  LE L EATK   HID   +   L       D     +   TK+ 
Sbjct: 926  INSACDRYKNEGLLQPLEGLIEATKDLGHIDRNKIYYTLLLSYDKADEAEKALGLWTKMQ 985

Query: 396  KEHVIEKHVFL 428
            +E+V     FL
Sbjct: 986  EENVTPNDAFL 996


>AE014134-2933|AAF53668.2| 1412|Drosophila melanogaster CG10302-PA
            protein.
          Length = 1412

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +3

Query: 216  VNAVENRPNNEKQLVYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVIPKGTKVY 395
            +N+  +R  NE  L  LE L EATK   HID   +   L       D     +   TK+ 
Sbjct: 926  INSACDRYKNEGLLQPLEGLIEATKDLGHIDRNKIYYTLLLSYDKADEAEKALGLWTKMQ 985

Query: 396  KEHVIEKHVFL 428
            +E+V     FL
Sbjct: 986  EENVTPNDAFL 996


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
           protein.
          Length = 1519

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 476 EHGGKASCVKNERMNISK 529
           EHGG ASC  NE  NI +
Sbjct: 103 EHGGSASCATNEETNIKR 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,519,878
Number of Sequences: 53049
Number of extensions: 359858
Number of successful extensions: 966
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)