Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0469
         (554 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457740-10|CAM36340.1|  351|Caenorhabditis elegans Hypothetical...    31   0.56 
U13071-4|AAA20671.1|  510|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulph...    27   6.9  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    27   9.1  

>CU457740-10|CAM36340.1|  351|Caenorhabditis elegans Hypothetical
           protein C50E10.10 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 349 CKMLSLMLFQKVPKFIXXXXXXXXXFCIYLTPYKIYKVITIARTWWKSELCQ 504
           C +L  ++   +P ++          CI+L P  I  V   +   WK+E CQ
Sbjct: 263 CGLLMTIVLDLIPIWLKNPMAQCIENCIFLNPLLICSVTLFSVPAWKNEFCQ 314


>U13071-4|AAA20671.1|  510|Caenorhabditis elegans Hypothetical
           protein T22F7.1 protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 261 ILTVFHYWADFRLHLHLW*SKKHFRRCCLQFLFLH 157
           +LT++    D  LHL +W   K    CC  F F++
Sbjct: 411 LLTMYFLSNDTSLHLIIWLVAKFCASCCYIFCFIY 445


>Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical
           protein C14B1.1 protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 228 ENRPNNEKQLVYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVIPK 380
           +N P N  ++V L +  E  KP+   DFEA   +  E    QD+++  +P+
Sbjct: 310 KNTPAN--RIVSLADQVEKFKPQEGEDFEAFTNSYLEGKSAQDLKAQDLPE 358


>U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulphide
           isomerase isoformI protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 228 ENRPNNEKQLVYLEELAEATKPRIHIDFEALEQALFERLLLQDVESNVIPK 380
           +N P N  ++V L +  E  KP+   DFEA   +  E    QD+++  +P+
Sbjct: 310 KNTPAN--RIVSLADQVEKFKPQEGEDFEAFTNSYLEGKSAQDLKAQDLPE 358


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 445  KELNRYRKTCFSMTCSL*TLVPFGITLDSTSCKSN--LSKSACSN 317
            K   + +  C S  CS  +L P+G+ LDS  C  +  + KSAC +
Sbjct: 1765 KNACKSQSMCLSK-CST-SLCPYGLVLDSIGCPRSECICKSACEH 1807


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,239,253
Number of Sequences: 27780
Number of extensions: 206583
Number of successful extensions: 543
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)