Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0467
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5BW73 Cluster: SJCHGC09372 protein; n=1; Schistosoma j...    34   3.7  
UniRef50_Q8NFA2 Cluster: NADPH oxidase organizer 1; n=19; Euther...    33   8.4  

>UniRef50_Q5BW73 Cluster: SJCHGC09372 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09372 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 544

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +2

Query: 329 EIYVSSKCRTGRVLCSAGMNGDVY--CRRTRQVVEVKKSNNPQNMCNYWCCRA-HG 487
           + + +++C  G   C  G  GD Y  CRR  +    +   +PQ  C Y  CR  HG
Sbjct: 46  QCHENARCEDGYCRCEEGFEGDGYRECRRKVKDPCARVRCHPQAQCEYGFCRCKHG 101


>UniRef50_Q8NFA2 Cluster: NADPH oxidase organizer 1; n=19;
           Eutheria|Rep: NADPH oxidase organizer 1 - Homo sapiens
           (Human)
          Length = 376

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -3

Query: 614 RADGPPE*LPTTAMPAAEPSRCLQI--RAFHRSNRSA*LPGSDVDRVPYNT 468
           +A  PP  +PT   P A  SRC  +  RA  R  R    P   VD VP+ T
Sbjct: 323 QATAPPPTVPTRPSPGAIQSRCCTVTRRALERRPRRQGRPRGCVDSVPHPT 373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,645,478
Number of Sequences: 1657284
Number of extensions: 12714135
Number of successful extensions: 30415
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30401
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)