Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0467
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.00 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.3  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 338 VSSKCRTGRVLCSAGMNGDVYCRRTR 415
           +SSK RTG ++CS   N   Y +R R
Sbjct: 354 MSSKFRTGFIICSES-NRKFYFKRAR 378


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 457 HILRVIRFFYFYYL 416
           H+L ++  +YFYY+
Sbjct: 251 HLLLLVCIYYFYYM 264


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 679 ITHISASIVRNILYYFFAV*ADEQTAHL 596
           + HI   +  +I+Y F  + AD    HL
Sbjct: 45  VDHIDPYLCTHIIYSFVGLQADGNVRHL 72


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 367 HPASPTLGAH 338
           HP SP  GAH
Sbjct: 112 HPESPNFGAH 121


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 564 RAKPLPTNPRFPPIE 520
           R  P PT P+ PP E
Sbjct: 204 RNVPKPTVPKIPPAE 218


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 423 TTCLVLRQ*TSPFIPALHNTLPVRHLELT 337
           TT LVL+  TSP +P +   + +  ++++
Sbjct: 321 TTNLVLKLLTSPLLPDIKEQVEILAVQVS 349


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 564 RAKPLPTNPRFPPIE 520
           R  P PT P+ PP E
Sbjct: 204 RNVPKPTVPKIPPAE 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,893
Number of Sequences: 336
Number of extensions: 3361
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)